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Simone Lemeer
Simone Lemeer
Utrecht University
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Year
Mass-spectrometry-based draft of the human proteome
M Wilhelm, J Schlegl, H Hahne, AM Gholami, M Lieberenz, MM Savitski, ...
Nature 509 (7502), 582-587, 2014
20832014
Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics
PJ Boersema, R Raijmakers, S Lemeer, S Mohammed, AJR Heck
Nature protocols 4 (4), 484-494, 2009
15902009
Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present
M Bantscheff, S Lemeer, MM Savitski, B Kuster
Analytical and bioanalytical chemistry 404, 939-965, 2012
10062012
Confident phosphorylation site localization using the Mascot Delta Score
MM Savitski, S Lemeer, M Boesche, M Lang, T Mathieson, M Bantscheff, ...
Molecular & cellular proteomics 10 (2), S1-S12, 2011
3122011
DMSO enhances electrospray response, boosting sensitivity of proteomic experiments
H Hahne, F Pachl, B Ruprecht, SK Maier, S Klaeger, D Helm, G Médard, ...
Nature methods 10 (10), 989-991, 2013
2502013
The phosphoproteomics data explosion
S Lemeer, AJR Heck
Current opinion in chemical biology 13 (4), 414-420, 2009
2082009
In-depth qualitative and quantitative profiling of tyrosine phosphorylation using a combination of phosphopeptide immunoaffinity purification and stable isotope dimethyl labeling
PJ Boersema, LY Foong, VMY Ding, S Lemeer, B van Breukelen, R Philp, ...
Molecular & Cellular Proteomics 9 (1), 84-99, 2010
1982010
Clec12a is an inhibitory receptor for uric acid crystals that regulates inflammation in response to cell death
K Neumann, M Castineiras-Vilarino, U Höckendorf, N Hannesschläger, ...
Immunity 40 (3), 389-399, 2014
1932014
A large synthetic peptide and phosphopeptide reference library for mass spectrometry–based proteomics
H Marx, S Lemeer, JE Schliep, L Matheron, S Mohammed, J Cox, M Mann, ...
Nature biotechnology 31 (6), 557-564, 2013
1912013
Meltome atlas—thermal proteome stability across the tree of life
A Jarzab, N Kurzawa, T Hopf, M Moerch, J Zecha, N Leijten, Y Bian, ...
Nature methods 17 (5), 495-503, 2020
1832020
Immunomodulatory drugs disrupt the cereblon–CD147–MCT1 axis to exert antitumor activity and teratogenicity
R Eichner, M Heider, V Fernández-Sáiz, F van Bebber, AK Garz, ...
Nature medicine 22 (7), 735-743, 2016
1822016
EGFR dynamics change during activation in native membranes as revealed by NMR
M Kaplan, S Narasimhan, C De Heus, D Mance, S Van Doorn, K Houben, ...
Cell 167 (5), 1241-1251. e11, 2016
1712016
Differential oxidation of protein-tyrosine phosphatases
A Groen, S Lemeer, T van der Wijk, J Overvoorde, AJR Heck, A Ostman, ...
Journal of Biological Chemistry 280 (11), 10298-10304, 2005
1712005
Widespread bacterial protein histidine phosphorylation revealed by mass spectrometry-based proteomics
CM Potel, MH Lin, AJR Heck, S Lemeer
Nature methods 15 (3), 187-190, 2018
1592018
A ubiquitin-interacting motif (UIM) is essential for Eps15 and Eps15R ubiquitination
E Klapisz, I Sorokina, S Lemeer, M Pijnenburg, AJ Verkleij, ...
Journal of Biological Chemistry 277 (34), 30746-30753, 2002
1352002
Comprehensive and reproducible phosphopeptide enrichment using iron immobilized metal ion affinity chromatography (Fe-IMAC) columns
B Ruprecht, H Koch, G Medard, M Mundt, B Kuster, S Lemeer
Molecular & Cellular Proteomics 14 (1), 205-215, 2015
1342015
Reversible oxidation of the membrane distal domain of receptor PTPα is mediated by a cyclic sulfenamide
J Yang, A Groen, S Lemeer, A Jans, M Slijper, SM Roe, J den Hertog, ...
Biochemistry 46 (3), 709-719, 2007
1232007
Ion mobility tandem mass spectrometry enhances performance of bottom-up proteomics
D Helm, JPC Vissers, CJ Hughes, H Hahne, B Ruprecht, F Pachl, A Grzyb, ...
Molecular & Cellular Proteomics 13 (12), 3709-3715, 2014
1212014
Phosphopeptide fragmentation and site localization by mass spectrometry: an update
CM Potel, S Lemeer, AJR Heck
Analytical chemistry 91 (1), 126-141, 2018
1082018
SCFFbxo9 and CK2 direct the cellular response to growth factor withdrawal via Tel2/Tti1 degradation and promote survival in multiple myeloma
V Fernández-Sáiz, BS Targosz, S Lemeer, R Eichner, C Langer, ...
Nature cell biology 15 (1), 72-81, 2013
1062013
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