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Joshua D. Kangas
Joshua D. Kangas
Assistant Teaching Professor, Carnegie Mellon University
Verified email at andrew.cmu.edu
Title
Cited by
Cited by
Year
Automated image analysis for high-content screening and analysis
A Shariff, J Kangas, LP Coelho, S Quinn, RF Murphy
Journal of biomolecular screening 15 (7), 726-734, 2010
1662010
Determining the subcellular location of new proteins from microscope images using local features
LP Coelho, JD Kangas, AW Naik, E Osuna-Highley, E Glory-Afshar, ...
Bioinformatics 29 (18), 2343-2349, 2013
812013
Active machine learning-driven experimentation to determine compound effects on protein patterns
AW Naik, JD Kangas, DP Sullivan, RF Murphy
Elife 5, e10047, 2016
562016
Optimizing drug discovery by investigative toxicology: current and future trends
M Beilmann, H Boonen, A Czich, G Dear, P Hewitt, T Mow, P Newham, ...
ALTEX-Alternatives to animal experimentation 36 (2), 289-313, 2019
552019
Structured literature image finder: extracting information from text and images in biomedical literature
LP Coelho, A Ahmed, A Arnold, J Kangas, AS Sheikh, EP Xing, ...
Linking Literature, Information, and Knowledge for Biology, 23-32, 2010
492010
Efficient discovery of responses of proteins to compounds using active learning
JD Kangas, AW Naik, RF Murphy
BMC bioinformatics 15 (1), 1-11, 2014
422014
Efficient modeling and active learning discovery of biological responses
AW Naik, JD Kangas, CJ Langmead, RF Murphy
PLoS One 8 (12), e83996, 2013
362013
Principles of bioimage informatics: Focus on machine learning of cell patterns
LP Coelho, E Glory-Afshar, J Kangas, S Quinn, A Shariff, RF Murphy
Linking Literature, Information, and Knowledge for Biology, 8-18, 2010
302010
Structured literature image finder: Parsing text and figures in biomedical literature
A Ahmed, A Arnold, LP Coelho, J Kangas, AS Sheikh, E Xing, W Cohen, ...
Web Semantics: Science, Services and Agents on the World Wide Web 8 (2-3 …, 2010
212010
Linking Literature, Information, and Knowledge for Biology
LP Coelho, A Ahmed, A Arnold, J Kangas, AS Sheikh, EP Xing, ...
Berlin, Heidelberg: Springer Berlin Heidelberg, 2010
82010
10 simple rules for teaching wet-lab experimentation to computational biology students, ie, turning computer mice into lab rats
JC Ayoob, JD Kangas
PLOS Computational Biology 16 (6), e1007911, 2020
52020
Structured literature image finder: Open source software for extracting and disseminating information from text and figures in biomedical literature
AS Sheikh, A Ahmed, A Arnold, LP Coelho, J Kangas, EP Xing, W Cohen, ...
Tech. rep., Carnegie Mellon University School of Computer Science …, 2009
42009
A method for characterizing phenotypic changes in highly variable cell populations and its application to high content screening of Arabidopsis thaliana protoplasts
GR Johnson, JD Kangas, A Dovzhenko, R Trojok, K Voigt, TD Majarian, ...
Cytometry Part A 91 (4), 326-335, 2017
32017
Structured literature image finder
A Ahmed, A Arnold, LP Coelho, J Kangas, AS Sheikh, E Xing, W Cohen, ...
Proc. of the ISMB BioLINK special interest group, 209-212, 2009
22009
Active learning for drug discovery
J Kangas, GK Rohde, J Schneider, DL Taylor
no. February, 2013
12013
Electronic system with a data engine for processing retrieved data in displaying graphical data for a graphical user interface on an external input/output device
AW Naik, JD Kangas, CJ Langmead, RF Murphy
US Patent App. 16/296,088, 2020
2020
Learning to predict effects of compounds on targets
AW Naik, JD Kangas, CJ Langmead, RF Murphy
US Patent App. 13/985,247, 2014
2014
Theses by Author
TE BUCK, LP COELHO, RE CURTIS, JM JOSEPH, S KADRI, J KANG, ...
AHMED, Amr CMU-CB-09-101 ARNOLD, Andrew CMU-CB-09-101 BUCK, Taráz E. CMU-CB-13-105 CHOWDHURY, Salim Akhter CMU-CB-15-101
LP COELHO, W COHEN, RE CURTIS, G DUGGAL, D FARROW, ...
AHMED, Amr CMU-CB-09-101 ARNOLD, Andrew CMU-CB-09-101 BUCK, Taráz E. CMU-CB-13-105 COELHO, Luis Pedro CMU-CB-09-101, CMU-CB-11-104
W COHEN, RE CURTIS, JM JOSEPH, S KADRI, H KAMISETTY, J KANG, ...
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Articles 1–20