| A survey of best practices for RNA-seq data analysis A Conesa, P Madrigal, S Tarazona, D Gomez-Cabrero, A Cervera, ... Genome biology 17, 1-19, 2016 | 3168 | 2016 |
| A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data AE Teschendorff, F Marabita, M Lechner, T Bartlett, J Tegner, ... Bioinformatics 29 (2), 189-196, 2013 | 1587 | 2013 |
| Multiple sclerosis genomic map implicates peripheral immune cells and microglia in susceptibility International Multiple Sclerosis Genetics Consortium*†, ANZgene, ... Science 365 (6460), eaav7188, 2019 | 1056 | 2019 |
| Mapping the human genetic architecture of COVID-19 Writing group Writing group leaders Pathak Gita A. 6 Andrews Shea J. 7 Kanai ... Nature 600 (7889), 472-477, 2021 | 814 | 2021 |
| Data integration in the era of omics: current and future challenges D Gomez-Cabrero, I Abugessaisa, D Maier, A Teschendorff, ... BMC systems biology 8, 1-10, 2014 | 493 | 2014 |
| An integrative analysis reveals coordinated reprogramming of the epigenome and the transcriptome in human skeletal muscle after training ME Lindholm, F Marabita, D Gomez-Cabrero, H Rundqvist, TJ Ekström, ... Epigenetics 9 (12), 1557-1569, 2014 | 281 | 2014 |
| An evaluation of analysis pipelines for DNA methylation profiling using the Illumina HumanMethylation450 BeadChip platform F Marabita, M Almgren, ME Lindholm, S Ruhrmann, F Fagerström-Billai, ... Epigenetics 8 (3), 333-346, 2013 | 253 | 2013 |
| DNA methylation as a mediator of HLA-DRB1*15:01 and a protective variant in multiple sclerosis L Kular, Y Liu, S Ruhrmann, G Zheleznyakova, F Marabita, ... Nature communications 9 (1), 2397, 2018 | 201 | 2018 |
| Single-cell RNA sequencing analysis reveals a crucial role for CTHRC1 (collagen triple helix repeat containing 1) cardiac fibroblasts after myocardial infarction A Ruiz-Villalba, JP Romero, SC Hernández, A Vilas-Zornoza, N Fortelny, ... Circulation 142 (19), 1831-1847, 2020 | 173 | 2020 |
| Identification of novel markers in rheumatoid arthritis through integrated analysis of DNA methylation and microRNA expression L de la Rica, JM Urquiza, D Gómez-Cabrero, AB Islam, N López-Bigas, ... Journal of autoimmunity 41, 6-16, 2013 | 171 | 2013 |
| Therapeutic efficacy of dimethyl fumarate in relapsing-remitting multiple sclerosis associates with ROS pathway in monocytes KE Carlström, E Ewing, M Granqvist, A Gyllenberg, S Aeinehband, ... Nature communications 10 (1), 3081, 2019 | 131 | 2019 |
| Cesarean delivery and hematopoietic stem cell epigenetics in the newborn infant: implications for future health? M Almgren, T Schlinzig, D Gomez-Cabrero, A Gunnar, M Sundin, ... American journal of obstetrics and gynecology 211 (5), 502. e1-502. e8, 2014 | 115 | 2014 |
| Functional genomics analysis of vitamin D effects on CD4+ T cells in vivo in experimental autoimmune encephalomyelitis M Zeitelhofer, MZ Adzemovic, D Gomez-Cabrero, P Bergman, ... Proceedings of the National Academy of Sciences 114 (9), E1678-E1687, 2017 | 105 | 2017 |
| Software for the integration of multiomics experiments in bioconductor M Ramos, L Schiffer, A Re, R Azhar, A Basunia, C Rodriguez, T Chan, ... Cancer research 77 (21), e39-e42, 2017 | 104 | 2017 |
| Monozygotic twins discordant for common variable immunodeficiency reveal impaired DNA demethylation during naive-to-memory B-cell transition VC Rodríguez-Cortez, L del Pino-Molina, J Rodríguez-Ubreva, L Ciudad, ... Nature communications 6 (1), 7335, 2015 | 91 | 2015 |
| Reconciling coherent oscillation with modulationof irregular spiking activity in selective attention: gamma-range synchronization between sensoryand executive cortical areas S Ardid, XJ Wang, D Gomez-Cabrero, A Compte Journal of Neuroscience 30 (8), 2856-2870, 2010 | 82 | 2010 |
| Proposals for enhanced health risk assessment and stratification in an integrated care scenario I Dueńas-Espín, E Vela, S Pauws, C Bescos, I Cano, M Cleries, JC Contel, ... BMJ open 6 (4), e010301, 2016 | 80 | 2016 |
| EULAR points to consider for the use of big data in rheumatic and musculoskeletal diseases L Gossec, J Kedra, H Servy, A Pandit, S Stones, F Berenbaum, A Finckh, ... Annals of the Rheumatic Diseases 79 (1), 69-76, 2020 | 76 | 2020 |
| Building gene regulatory networks from scATAC-seq and scRNA-seq using linked self organizing maps C Jansen, RN Ramirez, NC El-Ali, D Gomez-Cabrero, J Tegner, ... PLoS computational biology 15 (11), e1006555, 2019 | 74 | 2019 |
| Targeted lipidomics reveals extensive changes in circulating lipid mediators in patients with acutely decompensated cirrhosis C López-Vicario, A Checa, A Urdangarin, F Aguilar, J Alcaraz-Quiles, ... Journal of hepatology 73 (4), 817-828, 2020 | 73 | 2020 |
Jesper TegnérProfessor. Bio, CS, BioE, STAT,KAUST, Strategic Chaired Professor, Director, Karolinska InstitutetVerified email at kaust.edu.sa
