Michael F Seidl

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Bart ThommaProfessor of Evolutionary Microbiology, Universität zu KölnVerified email at uni-koeln.de
Luigi FainoUniversity of Rome "Sapienza"Verified email at uniroma1.it
Harold J.G. MeijerResearch Associate, Biointeractions & Plant Health; Plant Sciences Group, Wageningen University andVerified email at online.nl
Francine GoversProfessor Molecular Phytopathology, Wageningen UniversityVerified email at wur.nl
Berend SnelUtrecht UniversityVerified email at uu.nl
Guido Van den AckervekenAssociate Professor Plant-Microbe Interactions, Department of Biology, Utrecht University, NLVerified email at uu.nl
Jasper DepotterFrancis Crick InstituteVerified email at crick.ac.uk
Pedro CrousCBS-KNAW Fungal Biodiversity CentreVerified email at cbs.knaw.nl
Fernando Alexander García-BastidasScientist - Head Banana Breeding Program at KeyGeneVerified email at keygene.com
Hanna RovenichPostdoctoral Fellow, Group of Evolutionary Microbiology, University of CologneVerified email at uni-koeln.de
Dick de Ridderprofessor bioinformatics, Wageningen University & Research CentreVerified email at wur.nl
Theo Van der LeeSenior Researcher Wageningen-URVerified email at wur.nl
Hesham GibrielSenior Bioinformatics Data Scientist at Royal College of Surgeons in IrelandVerified email at ucd.ie
David E CookKansas State University, Dept. of Plant PathologyVerified email at ksu.edu
Alexander HeylAssociated Professor Biology Department, Adelphi UniversityVerified email at adelphi.edu
Corné M.J. PieterseProfessor Plant-Microbe Interactions, Department of Biology, Utrecht University, the NetherlandsVerified email at uu.nl
Michiel J.C. PelScientific Employee, Netherlands Food and Consumer Product Safety AuthorityVerified email at nvwa.nl
Lidija BerkeGenetwister TechnologiesVerified email at genetwister.nl
Francesco Mattia MancusoBioinformatics scientist @ Universal DiagnosticsVerified email at universaldx.com
Adrian SchneiderPost-doc, Utrecht UniversityVerified email at uu.nl

Michael F Seidl

Associate Professor, Theoretical Biology & Bioinformatics

Verified email at uu.nl

Bioinformatics Evolutionary Genomics Comparative Genomics


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Alternaria section Alternaria: Species, formae speciales or pathotypes? JHC Woudenberg, MF Seidl, JZ Groenewald, M De Vries, JB Stielow, ... Studies in mycology 82 (1), 1-21, 2015	495	2015
A gapless genome sequence of the fungus Botrytis cinerea JAL Van Kan, JHM Stassen, A Mosbach, TAJ Van Der Lee, L Faino, ... Molecular plant pathology 18 (1), 75-89, 2017	247	2017
Transposons passively and actively contribute to evolution of the two-speed genome of a fungal pathogen L Faino, MF Seidl, X Shi-Kunne, M Pauper, GCM van den Berg, ... Genome research 26 (8), 1091-1100, 2016	243	2016
Worse comes to worst: bananas and Panama disease—when plant and pathogen clones meet N Ordonez, MF Seidl, C Waalwijk, A Drenth, A Kilian, BPHJ Thomma, ... PLoS pathogens 11 (11), e1005197, 2015	233	2015
Distinctive Expansion of Potential Virulence Genes in the Genome of the Oomycete Fish Pathogen Saprolegnia parasitica RHY Jiang, I de Bruijn, BJ Haas, R Belmonte, L Löbach, J Christie, ... PLoS genetics 9 (6), e1003272, 2013	194	2013
DOWNY MILDEW RESISTANT 6 and DMR 6‐LIKE OXYGENASE 1 are partially redundant but distinct suppressors of immunity in Arabidopsis T Zeilmaker, NR Ludwig, J Elberse, MF Seidl, L Berke, A Van Doorn, ... The Plant Journal 81 (2), 210-222, 2015	184	2015
The Complete Genome Sequence of the Phytopathogenic Fungus Sclerotinia sclerotiorum Reveals Insights into the Genome Architecture of Broad Host Range … M Derbyshire, M Denton-Giles, D Hegedus, S Seifbarghy, J Rollins, ... Genome biology and evolution 9 (3), 593-618, 2017	167	2017
Single-molecule real-time sequencing combined with optical mapping yields completely finished fungal genome L Faino, MF Seidl, E Datema, GCM van den Berg, A Janssen, ... MBio 6 (4), 10.1128/mbio. 00936-15, 2015	142	2015
First Report of Fusarium Wilt Tropical Race 4 in Cavendish Bananas Caused by Fusarium odoratissimum in Colombia FA García-Bastidas, JC Quintero-Vargas, M Ayala-Vasquez, T Schermer, ... Plant disease 104 (3), 994-994, 2020	129	2020
New geographical insights of the latest expansion of Fusarium oxysporum f. sp. cubense tropical race 4 into the greater Mekong subregion SJ Zheng, FA García-Bastidas, X Li, L Zeng, T Bai, S Xu, K Yin, H Li, G Fu, ... Frontiers in Plant Science, 457, 2018	124	2018
Sex or no sex: evolutionary adaptation occurs regardless MF Seidl, BPHJ Thomma Bioessays 36 (4), 335-345, 2014	123	2014
Transposable elements direct the coevolution between plants and microbes MF Seidl, BPHJ Thomma Trends in Genetics 33 (11), 842-851, 2017	109	2017
Stress and sexual reproduction affect the dynamics of the wheat pathogen effector AvrStb6 and strobilurin resistance GHJ Kema, A Mirzadi Gohari, L Aouini, HAY Gibriel, SB Ware, ... Nature genetics 50 (3), 375-380, 2018	107	2018
Verticillium dahliae LysM effectors differentially contribute to virulence on plant hosts A Kombrink, H Rovenich, X Shi‐Kunne, E Rojas‐Padilla, ... Molecular plant pathology 18 (4), 596-608, 2017	107	2017
Mind the gap; seven reasons to close fragmented genome assemblies BPHJ Thomma, MF Seidl, X Shi-Kunne, DE Cook, MD Bolton, ... Fungal Genetics and Biology 90, 24-30, 2016	107	2016
Microbiome manipulation by a soil-borne fungal plant pathogen using effector proteins NC Snelders, H Rovenich, GC Petti, M Rocafort, GCM van den Berg, ... Nature Plants 6 (11), 1365-1374, 2020	102	2020
Interspecific hybridization impacts host range and pathogenicity of filamentous microbes JRL Depotter, MF Seidl, TA Wood, BPHJ Thomma Current Opinion in Microbiology 32, 7-13, 2016	93	2016
A domain-centric analysis of oomycete plant pathogen genomes reveals unique protein organization MF Seidl, G Van den Ackerveken, F Govers, B Snel Plant Physiology 155 (2), 628-644, 2011	92	2011
Pseudomonas syringae evades host immunity by degrading flagellin monomers with alkaline protease AprA MJC Pel, AJH van Dijken, BW Bardoel, MF Seidl, S van der Ent, ... Molecular Plant-Microbe Interactions 27 (7), 603-610, 2014	83	2014
Identification of Hyaloperonospora arabidopsidis transcript sequences expressed during infection reveals isolate-specific effectors A Cabral, JHM Stassen, MF Seidl, J Bautor, JE Parker, ... PLoS One 6 (5), e19328, 2011	75	2011

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