Christopher J Mungall

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Suzanna LewisLawrence Berkeley National LaboratoryVerified email at lbl.gov
Melissa HaendelUniversity of North CarolinaVerified email at tislab.org
Peter RobinsonBerlin Institute of Health, Charité - Universitätsmedizin, Berlin, GermanyVerified email at bih-charite.de
Barry SmithProfessor of Philosophy, Biomedical Informatics, and Computer Science, University at BuffaloVerified email at buffalo.edu
Nomi L. HarrisLawrence Berkeley National LaboratoryVerified email at lbl.gov
Sebastian KöhlerExpert AI engineer, Ada Health; Member of Monarch InitiativeVerified email at ada.com
Damian SmedleyQueen Mary University of LondonVerified email at qmul.ac.uk
Seth CarbonLawrence Berkeley National LaboratoryVerified email at lbl.gov
Georgios GkoutosUniversity of Birmingham, College of Medical and Dental SciencesVerified email at bham.ac.uk
David Osumi-SutherlandEuropean Bioinformatics InstituteVerified email at ebi.ac.uk
Nicole L WashingtonHelixVerified email at helix.com
Amelia IrelandUnaffiliatedVerified email at gmod.org
Nicole VasilevskyCritical Path InstituteVerified email at c-path.org
Nicolas MatentzogluSemanticly (Independent Consultant)Verified email at semanticly.ai
James P. BalhoffRenaissance Computing Institute (RENCI), University of North Carolina at Chapel HillVerified email at renci.org
Lincoln SteinDirector of Informatics and Biocomputing, Ontario Institute for Cancer Research Verified email at oicr.on.ca
Justin ReeseLawrence Berkeley National LabVerified email at lbl.gov
Ramona L. WallsBio5 University of Arizona, Critical Path InstituteVerified email at c-path.org
Judith BlakeProfessor of Mammalian GeneticsVerified email at jax.org
Richard H. ScheuermannJ. Craig Venter InstituteVerified email at jcvi.org

Christopher J Mungall

Lawrence Berkeley National Laboratory

Verified email at lbl.gov - Homepage

Bioinformatics Ontologies Artificial Intelligence Systems Biology Machine Reasoning


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
The Gene Ontology (GO) database and informatics resource Gene Ontology Consortium Nucleic acids research 32 (suppl_1), D258-D261, 2004	5765*	2004
Genome sequence of the human malaria parasite Plasmodium falciparum MJ Gardner, N Hall, E Fung, O White, M Berriman, RW Hyman, JM Carlton, ... Nature 419 (6906), 498-511, 2002	5578	2002
The gene ontology resource: 20 years and still GOing strong Gene Ontology Consortium Nucleic acids research 47 (D1), D330-D338, 2019	4013	2019
The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration B Smith, M Ashburner, C Rosse, J Bard, W Bug, W Ceusters, LJ Goldberg, ... Nature biotechnology 25 (11), 1251-1255, 2007	3116	2007
The Gene Ontology resource: enriching a GOld mine Nucleic acids research 49 (D1), D325-D334, 2021	2998	2021
An atlas of active enhancers across human cell types and tissues R Andersson, C Gebhard, I Miguel-Escalada, I Hoof, J Bornholdt, M Boyd, ... Nature 507 (7493), 455-461, 2014	2808	2014
Comparative genomics of the eukaryotes GM Rubin, MD Yandell, JR Wortman, GL Gabor, Miklos, CR Nelson, ... Science 287 (5461), 2204-2215, 2000	2211	2000
AmiGO: online access to ontology and annotation data S Carbon, A Ireland, CJ Mungall, SQ Shu, B Marshall, S Lewis, ... Bioinformatics 25 (2), 288-289, 2009	2145	2009
The Bioperl toolkit: Perl modules for the life sciences JE Stajich, D Block, K Boulez, SE Brenner, SA Chervitz, C Dagdigian, ... Genome research 12 (10), 1611-1618, 2002	1991	2002
Expansion of the Gene Ontology knowledgebase and resources Gene Ontology Consortium Nucleic acids research 45 (D1), D331-D338, 2017	1830*	2017
A promoter-level mammalian expression atlas Nature 507 (7493), 462-470, 2014	1819	2014
Relations in biomedical ontologies B Smith, W Ceusters, B Klagges, J Köhler, A Kumar, J Lomax, C Mungall, ... Genome biology 6 (5), R46, 2005	1423	2005
The generic genome browser: a building block for a model organism system database LD Stein, C Mungall, SQ Shu, M Caudy, M Mangone, A Day, E Nickerson, ... Genome research 12 (10), 1599-1610, 2002	1367	2002
Creating the gene ontology resource: design and implementation Gene Ontology Consortium Genome research 11 (8), 1425-1433, 2001	1349	2001
The gene ontology knowledgebase in 2023 SA Aleksander, J Balhoff, S Carbon, JM Cherry, HJ Drabkin, D Ebert, ... Genetics 224 (1), iyad031, 2023	1047	2023
Tools for neuroanatomy and neurogenetics in Drosophila BD Pfeiffer, A Jenett, AS Hammonds, TTB Ngo, S Misra, C Murphy, ... Proceedings of the National Academy of Sciences 105 (28), 9715-9720, 2008	1030	2008
The Sequence Ontology: a tool for the unification of genome annotations K Eilbeck, SE Lewis, CJ Mungall, M Yandell, L Stein, R Durbin, ... Genome biology 6, 1-12, 2005	979	2005
GOATOOLS: A Python library for Gene Ontology analyses DV Klopfenstein, L Zhang, BS Pedersen, F Ramírez, A Warwick Vesztrocy, ... Scientific reports 8 (1), 10872, 2018	954	2018
The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data S Köhler, SC Doelken, CJ Mungall, S Bauer, HV Firth, I Bailleul-Forestier, ... Nucleic acids research 42 (D1), D966-D974, 2014	950	2014
Gateways to the FANTOM5 promoter level mammalian expression atlas M Lizio, J Harshbarger, H Shimoji, J Severin, T Kasukawa, S Sahin, ... Genome biology 16, 1-14, 2015	926	2015

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