Carlos P Cantalapiedra
Carlos P Cantalapiedra
Centro de Biotecnología y Genómica de Plantas - UPM-INIA
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eggNOG-mapper v2: Functional Annotation, Orthology Assignments, and Domain Prediction at the Metagenomic Scale
CP Cantalapiedra, A Hernández-Plaza, I Letunic, P Bork, J Huerta-Cepas
Molecular Biology and Evolution 38 (12), 5825-5829, 2021
Profiling cellular diversity in sponges informs animal cell type and nervous system evolution
JM Musser, KJ Schippers, M Nickel, G Mizzon, AB Kohn, C Pape, ...
Science 374 (6568), 717-723, 2021
BARLEYMAP: physical and genetic mapping of nucleotide sequences and annotation of surrounding loci in barley
CP Cantalapiedra, R Boudiar, AM Casas, E Igartua, B Contreras-Moreira
Molecular breeding 35, 1-11, 2015
Towards the biogeography of prokaryotic genes
LP Coelho, R Alves, ÁR Del Río, PN Myers, CP Cantalapiedra, ...
Nature 601 (7892), 252-256, 2022
eggNOG 6.0: enabling comparative genomics across 12 535 organisms
A Hernández-Plaza, D Szklarczyk, J Botas, CP Cantalapiedra, ...
Nucleic Acids Research 51 (D1), D389-D394, 2023
Analysis of plant pan-genomes and transcriptomes with GET_HOMOLOGUES-EST, a clustering solution for sequences of the same species
B Contreras-Moreira, CP Cantalapiedra, MJ García-Pereira, SP Gordon, ...
Frontiers in plant science 8, 184, 2017
Comparative plastome genomics and phylogenomics of Brachypodium: flowering time signatures, introgression and recombination in recently diverged ecotypes
R Sancho, CP Cantalapiedra, D López‐Alvarez, SP Gordon, JP Vogel, ...
New Phytologist 218 (4), 1631-1644, 2018
Large differences in gene expression responses to drought and heat stress between elite barley cultivar Scarlett and a Spanish landrace
CP Cantalapiedra, MJ García-Pereira, MP Gracia, E Igartua, AM Casas, ...
Frontiers in plant science 8, 647, 2017
Harnessing novel diversity from landraces to improve an elite barley variety
A Monteagudo, AM Casas, CP Cantalapiedra, B Contreras-Moreira, ...
Frontiers in Plant Science 10, 434, 2019
Functional and evolutionary significance of unknown genes from uncultivated taxa
AR del Rio, J Giner-Lamia, CP Cantalapiedra, J Botas, Z Deng, ...
bioRxiv 2022.01.26.477801, 2022
Genetic association with high‐resolution climate data reveals selection footprints in the genomes of barley landraces across the Iberian Peninsula
B Contreras‐Moreira, R Serrano‐Notivoli, NE Mohammed, ...
Molecular ecology 28 (8), 1994-2012, 2019
Identification of quantitative trait loci for agronomic traits contributed by a barley (Hordeum vulgare) Mediterranean landrace
R Boudiar, AM Casas, CP Cantalapiedra, MP Gracia, E Igartua
Crop and Pasture Science 67 (1), 37-46, 2016
RSAT:: Plants: motif discovery within clusters of upstream sequences in plant genomes
B Contreras-Moreira, JA Castro-Mondragon, C Rioualen, ...
Plant Synthetic Promoters: Methods and Protocols, 279-295, 2016
Resequencing theVrs1 gene in Spanish barley landraces revealed reversion of six-rowed to two-rowed spike
AM Casas, B Contreras-Moreira, CP Cantalapiedra, S Sakuma, ...
Molecular Breeding 38, 1-12, 2018
A Cluster of Nucleotide‐Binding Site–Leucine‐Rich Repeat Genes Resides in a Barley Powdery Mildew Resistance Quantitative Trait Loci on 7HL
CP Cantalapiedra, B Contreras‐Moreira, C Silvar, D Perovic, F Ordon, ...
The plant genome 9 (2), plantgenome2015.10.0101, 2016
Selection footprints in barley breeding lines detected by combining genotyping-by-sequencing with reference genome information
E Igartua, E Mansour, CP Cantalapiedra, B Contreras-Moreira, MP Gracia, ...
Molecular breeding 35, 1-14, 2015
Candidate genes underlying QTL for flowering time and their interactions in a wide spring barley (Hordeum vulgare L.) cross
AM Casas, CR Gazulla, A Monteagudo, CP Cantalapiedra, M Moralejo, ...
The Crop Journal 9 (4), 862-872, 2021
PhyloCloud: an online platform for making sense of phylogenomic data
Z Deng, J Botas, CP Cantalapiedra, A Hernández-Plaza, ...
Nucleic acids research 50 (W1), W577-W582, 2022
Genome-wide association studies (GWAS) in barley
E Igartua, CP Cantalapiedra, AM Casas
Advances in breeding techniques for cereal crops, 503-536, 2019
Functional and evolutionary significance of unknown genes from uncultivated taxa
A Rodríguez, J Giner-Lamia, CP Cantalapiedra, J Botas, Z Deng, ...
Centro de Biotecnología y Genómica de Plantas (CBGP), 2024
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