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Elena Denisenko
Elena Denisenko
Research Fellow, Systems Biology and Genomics, Harry Perkins Institute of Medical Research
Verified email at perkins.org.au
Title
Cited by
Cited by
Year
An atlas of human long non-coding RNAs with accurate 5′ ends
CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ...
Nature 543 (7644), 199-204, 2017
10162017
Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows
E Denisenko, BB Guo, M Jones, R Hou, L De Kock, T Lassmann, D Poppe, ...
Genome biology 21, 1-25, 2020
4292020
Predicting cell-to-cell communication networks using NATMI
R Hou, E Denisenko, HT Ong, JA Ramilowski, ARR Forrest
Nature communications 11 (1), 5011, 2020
1632020
scMatch: a single-cell gene expression profile annotation tool using reference datasets
R Hou, E Denisenko, ARR Forrest
Bioinformatics 35 (22), 4688-4695, 2019
922019
Genome-wide profiling of transcribed enhancers during macrophage activation
E Denisenko, R Guler, MM Mhlanga, H Suzuki, F Brombacher, ...
Epigenetics & chromatin 10, 1-17, 2017
282017
Transcriptionally induced enhancers in the macrophage immune response to Mycobacterium tuberculosis infection
E Denisenko, R Guler, M Mhlanga, H Suzuki, F Brombacher, S Schmeier
BMC genomics 20, 1-16, 2019
222019
Intra-and intertumoral heterogeneity of liver metastases in a patient with uveal melanoma revealed by single-cell RNA sequencing
W Lin, AB Beasley, NM Ardakani, E Denisenko, L Calapre, M Jones, ...
Molecular Case Studies 7 (5), a006111, 2021
172021
IRNdb: the database of immunologically relevant non-coding RNAs
E Denisenko, D Ho, O Tamgue, M Ozturk, H Suzuki, F Brombacher, ...
Database 2016, baw138, 2016
152016
An evaluation of function of multicopy noncoding RNAs in mammals using ENCODE/FANTOM data and comparative genomics
MP Hoeppner, E Denisenko, PP Gardner, S Schmeier, AM Poole
Molecular Biology and Evolution 35 (6), 1451-1462, 2018
102018
Therapeutic blockade of ER stress and inflammation prevents NASH and progression to HCC
E Boslem, S Reibe, R Carlessi, B Smeuninx, S Tegegne, CL Egan, ...
Science Advances 9 (37), eadh0831, 2023
92023
Characterization of the humanized FRG mouse model and development of an AAV-LK03 variant with improved liver lobular biodistribution
M Cabanes-Creus, RG Navarro, SHY Liao, S Scott, R Carlessi, ...
Molecular Therapy-Methods & Clinical Development 28, 220-237, 2023
92023
Single-nucleus RNA sequencing of pre-malignant liver reveals disease-associated hepatocyte state with HCC prognostic potential
R Carlessi, E Denisenko, E Boslem, J Köhn-Gaone, N Main, NDBA Bakar, ...
Cell Genomics 3 (5), 2023
82023
Spatial transcriptomics reveals discrete tumour microenvironments and autocrine loops within ovarian cancer subclones
E Denisenko, L de Kock, A Tan, AB Beasley, M Beilin, ME Jones, R Hou, ...
Nature Communications 15 (1), 2860, 2024
7*2024
Single-nucleus RNA sequencing reveals novel molecular signatures of healthy and chronically injured liver
R Carlessi, J Köhn-Gaone, NDA Bakar, E Denisenko, M Jones, D Poppe, ...
Journal of Gastroenteology and Hepatology 35 (S1), 25-26, 2020
2020
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