| The bioleaching potential of a bacterial consortium M Latorre, MP Cortés, D Travisany, A Di Genova, M Budinich, ... Bioresource technology 218, 659-666, 2016 | 97 | 2016 |
| A new genome of Acidithiobacillus thiooxidans provides insights into adaptation to a bioleaching environment D Travisany, MP Cortés, M Latorre, A Di Genova, M Budinich, ... Research in microbiology 165 (9), 743-752, 2014 | 70 | 2014 |
| Environmental vulnerability of the global ocean epipelagic plankton community interactome S Chaffron, E Delage, M Budinich, D Vintache, N Henry, C Nef, M Ardyna, ... Science Advances 7 (35), eabg1921, 2021 | 65 | 2021 |
| A multi-objective constraint-based approach for modeling genome-scale microbial ecosystems M Budinich, J Bourdon, A Larhlimi, D Eveillard PloS one 12 (2), e0171744, 2017 | 57 | 2017 |
| Stoichiometric modeling of oxidation of reduced inorganic sulfur compounds (Riscs) in Acidithiobacillus thiooxidans RA Bobadilla Fazzini, MP Cortés, L Padilla, D Maturana, M Budinich, ... Biotechnology and Bioengineering 110 (8), 2242-2251, 2013 | 55 | 2013 |
| Metabolomic study of Chilean biomining bacteria Acidithiobacillus ferrooxidans strain Wenelen and Acidithiobacillus thiooxidans strain Licanantay P Martínez, S Gálvez, N Ohtsuka, M Budinich, MP Cortés, C Serpell, ... Metabolomics 9, 247-257, 2013 | 47 | 2013 |
| Priorities for ocean microbiome research Tara Ocean Foundation Abreu Andre 1 Bourgois Etienne 1 Gristwood Adam 1 http ... Nature Microbiology 7 (7), 937-947, 2022 | 38 | 2022 |
| Global transcriptional responses of Acidithiobacillus ferrooxidans Wenelen under different sulfide minerals M Latorre, N Ehrenfeld, MP Cortés, D Travisany, M Budinich, A Aravena, ... Bioresource Technology 200, 29-34, 2016 | 26 | 2016 |
| Enterococcus faecalis reconfigures its transcriptional regulatory network activation at different copper levels M Latorre, J Galloway-Peña, JH Roh, M Budinich, A Reyes-Jara, ... Metallomics 6 (3), 572-581, 2014 | 26 | 2014 |
| Contribution of genome‐scale metabolic modelling to niche theory A Régimbeau, M Budinich, A Larhlimi, JJ Pierella Karlusich, O Aumont, ... Ecology Letters 25 (6), 1352-1364, 2022 | 14 | 2022 |
| Environmental vulnerability of the global ocean plankton community interactome S Chaffron, E Delage, M Budinich, D Vintache, N Henry, C Nef, M Ardyna, ... BioRxiv, 2020.11. 09.375295, 2020 | 12 | 2020 |
| Enterococcus faecalis reconfigures its transcriptional regulatory network activation at different copper levels. Metallomics 6: 572–581 M Latorre, J Galloway-Pena, JH Roh, M Budinich, A Reyes-Jara, ... | 7 | 2014 |
| Ocean-wide comparisons of mesopelagic planktonic community structures J Rigonato, M Budinich, AA Murillo, MC Brandão, JJ Pierella Karlusich, ... ISME communications 3 (1), 83, 2023 | 6* | 2023 |
| Niche partitioning and plastisphere core microbiomes in the two most plastic polluted zones of the world ocean J Jacquin, M Budinich, S Chaffron, V Barbe, F Lombard, ML Pedrotti, ... Environmental Science and Pollution Research, 1-19, 2024 | 1 | 2024 |
| Enterococcus faecalis reconfigures its gene regulatory network activation under copper exposure M Latorre, J Galloway-Peña, JH Roh, M Budinich, A Reyes-Jara, ... Metallomics: integrated biometal science 6 (3), 572, 2014 | 1 | 2014 |
| Community metabolic modeling of host-microbiota interactions through multi-objective optimization A Lambert, M Budinich, M Mahé, S Chaffron, D Eveillard Iscience 27 (6), 2024 | | 2024 |
| Impact of the species compartment definition on quantitative modeling of microbial communities M Budinich, J Bourdon, D Eveillard bioRxiv, 018010, 2015 | | 2015 |
| OPINION PAPER Evolutionary Constraint-Based Formulation Requires New Bi-level Solving Techniques M Budinich, J Bourdon, A Larhlimi, D Eveillard Computational Methods in Systems Biology: 13th International Conference …, 2015 | | 2015 |
| MeDUSA: a sage-based tool for computing the stoichiometric capacitance of a metabolic network M Budinich, D Eveillard, J Bourdon, A Larhlimi | | 2013 |
| Global transcriptional responses of Acidithiobacillus ferrooxidans Wenelen under different sulfide minerals D TRAVISANY, M BUDINICH, M GONZALEZ, RA BOBADILLA-FAZZINI, ... | | |
