Nicolas Bertin

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Marc VidalProfessor of Genetics, Harvard Medical SchoolVerified email at dfci.harvard.edu
Carninci PieroRIKEN IMS (Yokohama, JP) and Human Technopole (Milan, IT)Verified email at postman.riken.jp
Denis DupuyInsermVerified email at inserm.fr
Frederick P (Fritz) RothUniversity of Pittsburgh School of Medicine, Department of Computational & Systems BiologyVerified email at pitt.edu
Charles PlessyOkinawa Institute of Science and Technology Graduate UniversityVerified email at oist.jp
Alistair ForrestSystems Biology and Genomics Lab, Harry Perkins Institute of Medical Research, UWAVerified email at perkins.uwa.edu.au
Debra S GoldbergUniversity of ColoradoVerified email at colorado.edu
Gabriel BerrizHarvard Medical SchoolVerified email at hms.harvard.edu
Albertha J M WalhoutProfessor and Chair, Department of Systems Biology, UMass Medical SchoolVerified email at umassmed.edu
Jessica SeverinRIKENVerified email at gsc.riken.jp
Timo LassmannThe Kids Research Institute Australia & University of Western AustraliaVerified email at telethonkids.org.au
dejan lazarevicCOSR,HSR,MilanVerified email at hsr.it
Stefano GustincichDeputy Director Life Tech Istituto Italiano di TecnologiaVerified email at iit.it
Roberto SimoneSenior Research AssociateVerified email at ucl.ac.uk
Hideya KawajiTokyo Metropolitan Institute of Medical ScienceVerified email at igakuken.or.jp
David E HillDana-Farber Cancer InstituteVerified email at dfci.harvard.edu
Albin SandelinThe Bioinformatics Centre, Department of Biology & BRIC, Copenhagen University, DenmarkVerified email at binf.ku.dk
Kristin C GunsalusProfessor of Biology, New York UniversityVerified email at nyu.edu
Md. SalimullahDirector General (Additional Charge) & Chief Scientific Officer, National Institute of BiotechnologyVerified email at nib.gov.bd
Anton KratzAssociate Professor, Nagasaki University, DEJIMA Infectious Disease Research Alliance (DIDA), JapanVerified email at nagasaki-u.ac.jp

Nicolas Bertin

Genome Institute of Singapore

Verified email at gis.a-star.edu.sg - Homepage

systems biology cancer biology functional genomics computational biology


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An atlas of active enhancers across human cell types and tissues R Andersson, C Gebhard, I Miguel-Escalada, I Hoof, J Bornholdt, M Boyd, ... Nature 507 (7493), 455-461, 2014	2805	2014
A map of the interactome network of the metazoan C. elegans S Li, CM Armstrong, N Bertin, H Ge, S Milstein, M Boxem, PO Vidalain, ... Science 303 (5657), 540-543, 2004	2201	2004
Evidence for dynamically organized modularity in the yeast protein–protein interaction network JDJ Han, N Bertin, T Hao, DS Goldberg, GF Berriz, LV Zhang, D Dupuy, ... Nature 430 (6995), 88-93, 2004	2161	2004
A promoter-level mammalian expression atlas Nature 507 (7493), 462-470, 2014	1817	2014
An atlas of human long non-coding RNAs with accurate 5′ ends CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ... Nature 543 (7644), 199-204, 2017	1062	2017
Gateways to the FANTOM5 promoter level mammalian expression atlas M Lizio, J Harshbarger, H Shimoji, J Severin, T Kasukawa, S Sahin, ... Genome biology 16, 1-14, 2015	923	2015
An atlas of combinatorial transcriptional regulation in mouse and man T Ravasi, H Suzuki, CV Cannistraci Cell 140 (5), 744-752, 2010	864	2010
Network modeling links breast cancer susceptibility and centrosome dysfunction MA Pujana, JDJ Han, LM Starita, KN Stevens, M Tewari, JS Ahn, ... Nature genetics 39 (11), 1338-1349, 2007	730	2007
Annotation transfer between genomes: protein–protein interologs and protein–DNA regulogs H Yu, NM Luscombe, HX Lu, X Zhu, Y Xia, JDJ Han, N Bertin, S Chung, ... Genome research 14 (6), 1107-1118, 2004	693	2004
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ... Science 347 (6225), 1010-1014, 2015	637	2015
An integrated expression atlas of miRNAs and their promoters in human and mouse D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ... Nature biotechnology 35 (9), 872-878, 2017	616	2017
Effect of sampling on topology predictions of protein-protein interaction networks JDJ Han, D Dupuy, N Bertin, ME Cusick, M Vidal Nature biotechnology 23 (7), 839-844, 2005	451	2005
C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression J Reboul, P Vaglio, JF Rual, P Lamesch, M Martinez, CM Armstrong, S Li, ... Nature genetics 34 (1), 35-41, 2003	450	2003
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line Nature genetics 41 (5), 553-562, 2009	431	2009
Functional Genomic Analysis of RNA Interference in C. elegans JK Kim, HW Gabel, RS Kamath, M Tewari, A Pasquinelli, JF Rual, ... Science 308 (5725), 1164-1167, 2005	375	2005
Genome-scale analysis of in vivo spatiotemporal promoter activity in Caenorhabditis elegans D Dupuy, N Bertin, CA Hidalgo, K Venkatesan, D Tu, D Lee, J Rosenberg, ... Nature biotechnology 25 (6), 663-668, 2007	358	2007
Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network N Simonis, JF Rual, AR Carvunis, M Tasan, I Lemmens, ... Nature methods 6 (1), 47-54, 2009	348	2009
Predictive models of molecular machines involved in Caenorhabditis elegans early embryogenesis KC Gunsalus, H Ge, AJ Schetter, DS Goldberg, JDJ Han, T Hao, GF Berriz, ... Nature 436 (7052), 861-865, 2005	336	2005
Unexpected expression of α-and β-globin in mesencephalic dopaminergic neurons and glial cells M Biagioli, M Pinto, D Cesselli, M Zaninello, D Lazarevic, P Roncaglia, ... Proceedings of the National Academy of Sciences 106 (36), 15454-15459, 2009	334	2009
Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency maintenance A Fort, K Hashimoto, D Yamada, M Salimullah, CA Keya, A Saxena, ... Nature genetics 46 (6), 558-566, 2014	324	2014

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