Shaojun Pan
Shaojun Pan
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Towards the biogeography of prokaryotic genes
LP Coelho, R Alves, ÁR Del Río, PN Myers, CP Cantalapiedra, ...
Nature 601 (7892), 252-256, 2022
A deep siamese neural network improves metagenome-assembled genomes in microbiome datasets across different environments
S Pan, C Zhu, XM Zhao, LP Coelho
Nature communications 13 (1), 2326, 2022
STAB: a spatio-temporal cell atlas of the human brain
L Song, S Pan, Z Zhang, L Jia, WH Chen, XM Zhao
Nucleic Acids Research 49 (D1), D1029-D1037, 2021
Macrel: antimicrobial peptide screening in genomes and metagenomes
CD Santos-Junior, S Pan, XM Zhao, LP Coelho
PeerJ 8, e10555, 2020
mMGE: a database for human metagenomic extrachromosomal mobile genetic elements
S Lai, L Jia, B Subramanian, S Pan, J Zhang, Y Dong, WH Chen, ...
Nucleic acids research 49 (D1), D783-D791, 2021
SemiBin2: self-supervised contrastive learning leads to better MAGs for short-and long-read sequencing
S Pan, XM Zhao, LP Coelho
Bioinformatics 39 (Supplement_1), i21–i29, 2023
metaMIC: reference-free misassembly identification and correction of de novo metagenomic assemblies
S Lai, S Pan, C Sun, LP Coelho, WH Chen, XM Zhao
Genome Biology 23 (1), 242, 2022
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