Rapid SNP discovery and genetic mapping using sequenced RAD markers NA Baird, PD Etter, TS Atwood, MC Currey, AL Shiver, ZA Lewis, ... PloS one 3 (10), e3376, 2008 | 3895 | 2008 |
Diverse pathways generate microRNA-like RNAs and Dicer-independent small interfering RNAs in fungi HC Lee, L Li, W Gu, Z Xue, SK Crosthwaite, A Pertsemlidis, ZA Lewis, ... Molecular cell 38 (6), 803-814, 2010 | 418 | 2010 |
DNA methylation: shared and divergent features across eukaryotes RJ Schmitz, ZA Lewis, MG Goll Trends in Genetics 35 (11), 818-827, 2019 | 191 | 2019 |
Multiple oscillators regulate circadian gene expression in Neurospora A Correa, ZA Lewis, AV Greene, IJ March, RH Gomer, D Bell-Pedersen Proceedings of the National Academy of Sciences 100 (23), 13597-13602, 2003 | 181 | 2003 |
Relics of repeat-induced point mutation direct heterochromatin formation in Neurospora crassa ZA Lewis, S Honda, TK Khlafallah, JK Jeffress, M Freitag, F Mohn, ... Genome research 19 (3), 427-437, 2009 | 170 | 2009 |
Regional control of histone H3 lysine 27 methylation in Neurospora K Jamieson, MR Rountree, ZA Lewis, JE Stajich, EU Selker Proceedings of the National Academy of Sciences 110 (15), 6027-6032, 2013 | 167 | 2013 |
vvd is required for light adaptation of conidiation-specific genes of Neurospora crassa, but not circadian conidiation LB Shrode, ZA Lewis, LD White, D Bell-Pedersen, DJ Ebbole Fungal Genetics and Biology 32 (3), 169-181, 2001 | 147 | 2001 |
DNA methylation and normal chromosome behavior in Neurospora depend on five components of a histone methyltransferase complex, DCDC ZA Lewis, KK Adhvaryu, S Honda, AL Shiver, M Knip, R Sack, EU Selker PLoS genetics 6 (11), e1001196, 2010 | 119 | 2010 |
Overexpression of White Collar‐1 (WC‐1) activates circadian clock‐associated genes, but is not sufficient to induce most light‐regulated gene expression in Neurospora crassa ZA Lewis, A Correa, C Schwerdtfeger, KL Link, X Xie, RH Gomer, ... Molecular microbiology 45 (4), 917-931, 2002 | 113 | 2002 |
CHD1 Remodels Chromatin and Influences Transient DNA Methylation at the Clock Gene frequency WJ Belden, ZA Lewis, EU Selker, JJ Loros, JC Dunlap PLoS genetics 7 (7), e1002166, 2011 | 108 | 2011 |
Transcriptional response to glucose starvation and functional analysis of a glucose transporter of Neurospora crassa X Xie, HH Wilkinson, A Correa, ZA Lewis, D Bell-Pedersen, DJ Ebbole Fungal genetics and biology 41 (12), 1104-1119, 2004 | 91 | 2004 |
Genome-wide redistribution of H3K27me3 is linked to genotoxic stress and defective growth EY Basenko, T Sasaki, L Ji, CJ Prybol, RM Burckhardt, RJ Schmitz, ... Proceedings of the National Academy of Sciences 112 (46), E6339-E6348, 2015 | 87 | 2015 |
KdmB, a Jumonji histone H3 demethylase, regulates genome-wide H3K4 trimethylation and is required for normal induction of secondary metabolism in Aspergillus nidulans A Gacek-Matthews, H Berger, T Sasaki, K Wittstein, C Gruber, ZA Lewis, ... PLoS Genetics 12 (8), e1006222, 2016 | 84 | 2016 |
Methylated DNA is over-represented in whole-genome bisulfite sequencing data L Ji, T Sasaki, X Sun, P Ma, ZA Lewis, RJ Schmitz Frontiers in genetics 5, 341, 2014 | 81 | 2014 |
The maternal to zygotic transition regulates genome-wide heterochromatin establishment in the zebrafish embryo K Laue, S Rajshekar, AJ Courtney, ZA Lewis, MG Goll Nature Communications 10 (1), 1551, 2019 | 78 | 2019 |
Heterochromatin protein 1 forms distinct complexes to direct histone deacetylation and DNA methylation S Honda, ZA Lewis, K Shimada, W Fischle, R Sack, EU Selker Nature structural & molecular biology 19 (5), 471-477, 2012 | 76 | 2012 |
Two circadian timing circuits in Neurospora crassa cells share components and regulate distinct rhythmic processes RM de Paula, ZA Lewis, AV Greene, KS Seo, LW Morgan, MW Vitalini, ... Journal of biological rhythms 21 (3), 159-168, 2006 | 72 | 2006 |
The DMM complex prevents spreading of DNA methylation from transposons to nearby genes in Neurospora crassa S Honda, ZA Lewis, M Huarte, LY Cho, LL David, Y Shi, EU Selker Genes & development 24 (5), 443-454, 2010 | 67 | 2010 |
High-density detection of restriction-site-associated DNA markers for rapid mapping of mutated loci in Neurospora ZA Lewis, AL Shiver, N Stiffler, MR Miller, EA Johnson, EU Selker Genetics 177 (2), 1163-1171, 2007 | 64 | 2007 |
Dectin-2-targeted antifungal liposomes exhibit enhanced efficacy S Ambati, EC Ellis, J Lin, X Lin, ZA Lewis, RB Meagher MSphere 4 (5), 10.1128/msphere. 00715-19, 2019 | 63 | 2019 |