Bart Deplancke
Bart Deplancke
Professor in Systems Biology and Genetics at EPFL
Verified email at
Cited by
Cited by
The human cell atlas
A Regev, SA Teichmann, ES Lander, I Amit, C Benoist, E Birney, ...
elife 6, e27041, 2017
Microbial modulation of innate defense: goblet cells and the intestinal mucus layer
B Deplancke, HR Gaskins
The American journal of clinical nutrition 73 (6), 1131S-1141S, 2001
Exhaustion of tumor-specific CD8+ T cells in metastases from melanoma patients
L Baitsch, P Baumgaertner, E DevÍvre, SK Raghav, A Legat, L Barba, ...
The Journal of clinical investigation 121 (6), 2350-2360, 2011
Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines
W Huang, A Massouras, Y Inoue, J Peiffer, M Rŗmia, AM Tarone, ...
Genome research 24 (7), 1193-1208, 2014
Morphological and molecular characterization of adult midgut compartmentalization in Drosophila
N Buchon, D Osman, FPA David, HY Fang, JP Boquete, B Deplancke, ...
Cell reports 3 (5), 1725-1738, 2013
Tetracyclines disturb mitochondrial function across eukaryotic models: a call for caution in biomedical research
N Moullan, L Mouchiroud, X Wang, D Ryu, EG Williams, A Mottis, ...
Cell reports 10 (10), 1681-1691, 2015
Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches
M Guilliams, J Bonnardel, B Haest, B Vanderborght, C Wagner, ...
Cell 185 (2), 379-396. e38, 2022
Coordinated effects of sequence variation on DNA binding, chromatin structure, and transcription
H Kilpinen, SM Waszak, AR Gschwind, SK Raghav, RM Witwicki, A Orioli, ...
Science 342 (6159), 744-747, 2013
A stromal cell population that inhibits adipogenesis in mammalian fat depots
PC Schwalie, H Dong, M Zachara, J Russeil, D Alpern, N Akchiche, ...
Nature 559 (7712), 103-108, 2018
Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly
H Li, J Janssens, M De Waegeneer, SS Kolluru, K Davie, V Gardeux, ...
Science 375 (6584), eabk2432, 2022
The genetics of transcription factor DNA binding variation
B Deplancke, D Alpern, V Gardeux
Cell 166 (3), 538-554, 2016
Fermentation by gut microbiota cultured in a simulator of the human intestinal microbial ecosystem is improved by supplementing a soygerm powder
P De Boever, W Verstraete, B Deplancke
The Journal of nutrition 130 (10), 2599-2606, 2000
A gene-centered C. elegans protein-DNA interaction network
B Deplancke, A Mukhopadhyay, W Ao, AM Elewa, CA Grove, NJ Martinez, ...
Cell 125 (6), 1193-1205, 2006
Chromatin immunoprecipitation (ChIP) coupled to detection by quantitative real-time PCR to study transcription factor binding to DNA in Caenorhabditis elegans
A Mukhopadhyay, B Deplancke, AJM Walhout, HA Tissenbaum
Nature protocols 3 (4), 698-709, 2008
A gateway-compatible yeast one-hybrid system
B Deplancke, D Dupuy, M Vidal, AJM Walhout
Genome research 14 (10b), 2093-2101, 2004
Conservation of transcription factor binding specificities across 600 million years of bilateria evolution
KR Nitta, A Jolma, Y Yin, E Morgunova, T Kivioja, J Akhtar, K Hens, ...
elife 4, e04837, 2015
A compendium of Caenorhabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks
JS Reece-Hoyes, B Deplancke, J Shingles, CA Grove, IA Hope, ...
Genome biology 6, 1-12, 2005
Molecular ecological analysis of porcine ileal microbiota responses to antimicrobial growth promoters
CT Collier, MR Smiricky-Tjardes, DM Albin, JE Wubben, VM Gabert, ...
Journal of animal science 81 (12), 3035-3045, 2003
Population variation and genetic control of modular chromatin architecture in humans
SM Waszak, O Delaneau, AR Gschwind, H Kilpinen, SK Raghav, ...
Cell 162 (5), 1039-1050, 2015
Hydrogen sulfide induces serum‐independent cell cycle entry in nontransformed rat intestinal epithelial cells
B Deplancke, HR Gaskins
The FASEB journal 17 (10), 1310-1312, 2003
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