Albertha J M Walhout
Albertha J M Walhout
Professor and Chair, Department of Systems Biology, UMass Medical School
Verified email at - Homepage
Cited by
Cited by
Evidence for dynamically organized modularity in the yeast protein–protein interaction network
JDJ Han, N Bertin, T Hao, DS Goldberg, GF Berriz, LV Zhang, D Dupuy, ...
Nature 430 (6995), 88-93, 2004
Determination and inference of eukaryotic transcription factor sequence specificity
MT Weirauch, A Yang, M Albu, AG Cote, A Montenegro-Montero, P Drewe, ...
Cell 158 (6), 1431-1443, 2014
Protein interaction mapping in C. elegans using proteins involved in vulval development
AJM Walhout, R Sordella, X Lu, JL Hartley, GF Temple, MA Brasch, ...
Science 287 (5450), 116-122, 2000
[34] GATEWAY recombinational cloning: Application to the cloning of large numbers of open reading frames or ORFeomes
AJM Walhout, GF Temple, MA Brasch, JL Hartley, MA Lorson, ...
Methods in enzymology 328, 575-IN7, 2000
Integrating ‘omic’information: a bridge between genomics and systems biology
H Ge, AJM Walhout, M Vidal
TRENDS in Genetics 19 (10), 551-560, 2003
Widespread macromolecular interaction perturbations in human genetic disorders
N Sahni, S Yi, M Taipale, JIF Bass, J Coulombe-Huntington, F Yang, ...
Cell 161 (3), 647-660, 2015
Gene regulatory networks and the role of robustness and stochasticity in the control of gene expression
LT MacNeil, AJM Walhout
Genome research 21 (5), 645-657, 2011
High-throughput yeast two-hybrid assays for large-scale protein interaction mapping
AJM Walhout, M Vidal
Methods 24 (3), 297-306, 2001
A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors
CA Grove, F De Masi, MI Barrasa, DE Newburger, MJ Alkema, ML Bulyk, ...
Cell 138 (2), 314-327, 2009
Diet-induced developmental acceleration independent of TOR and insulin in C. elegans
LT MacNeil, E Watson, HE Arda, LJ Zhu, AJM Walhout
Cell 153 (1), 240-252, 2013
The interplay between transcription factors and microRNAs in genome‐scale regulatory networks
NJ Martinez, AJM Walhout
Bioessays 31 (4), 435-445, 2009
A C. elegans genome-scale microRNA network contains composite feedback motifs with high flux capacity
NJ Martinez, MC Ow, MI Barrasa, M Hammell, R Sequerra, ...
Genes & development 22 (18), 2535-2549, 2008
A gene-centered C. elegans protein-DNA interaction network
B Deplancke, A Mukhopadhyay, W Ao, AM Elewa, CA Grove, NJ Martinez, ...
Cell 125 (6), 1193-1205, 2006
Chromatin immunoprecipitation (ChIP) coupled to detection by quantitative real-time PCR to study transcription factor binding to DNA in Caenorhabditis elegans
A Mukhopadhyay, B Deplancke, AJM Walhout, HA Tissenbaum
Nature protocols 3 (4), 698-709, 2008
A gateway-compatible yeast one-hybrid system
B Deplancke, D Dupuy, M Vidal, AJM Walhout
Genome research 14 (10b), 2093-2101, 2004
Interspecies systems biology uncovers metabolites affecting C. elegans gene expression and life history traits
E Watson, LT MacNeil, AD Ritter, LS Yilmaz, AP Rosebrock, AA Caudy, ...
Cell 156 (4), 759-770, 2014
Genome-scale spatiotemporal analysis of Caenorhabditis elegans microRNA promoter activity
NJ Martinez, MC Ow, JS Reece-Hoyes, MI Barrasa, VR Ambros, ...
Genome research 18 (12), 2005-2015, 2008
A compendium of Caenorhabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks
JS Reece-Hoyes, B Deplancke, J Shingles, CA Grove, IA Hope, ...
Genome biology 6, 1-12, 2005
Bacterial metabolism affects the C. elegans response to cancer chemotherapeutics
AP García-González, AD Ritter, S Shrestha, EC Andersen, LS Yilmaz, ...
Cell 169 (3), 431-441. e8, 2017
Using networks to measure similarity between genes: association index selection
JIF Bass, A Diallo, J Nelson, JM Soto, CL Myers, AJM Walhout
Nature methods 10 (12), 1169-1176, 2013
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