Robin Gras

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Ron D. AppelFormer Executive Director, SIB Swiss Institute of BioinformaticsVerified email at sib.swiss
Markus MullerDepartment of Oncology, CHUV and Vital-IT, SIB Swiss Institute of BioinformaticsVerified email at sib.swiss
Willy BienvenutGQE - Le Moulon, INRAVerified email at u-psud.fr
Abbas GolestaniResearch Scientist, metaVerified email at meta.com
Amos BairochEmeritus professor at the University of Geneva & group leader, SIB Swiss Institute of BioinformaticsVerified email at sib.swiss
David HernandezGeneva University Hospitals, Genomic Research LaboratoryVerified email at genomic.ch
Patricia M. PalagiSIB Swiss Institute of BionformaticsVerified email at sib.swiss
Melania CristescuMcGill UniversityVerified email at mcgill.ca
Marc WilkinsUniversity of New South Wales, Sydney, AustraliaVerified email at unsw.edu.au
Didier DevaursUniversity of StrathclydeVerified email at strath.ac.uk
Sourodeep BhattacharjeePhD Candidate, University of WindsorVerified email at uwindsor.ca
Antoine DanchinUniversity of Hong Kong (Hon. Prof)Verified email at normalesup.org
Luis RuedaProfessor, School of Computer Science, University of WindsorVerified email at uwindsor.ca
Andrew HendryRedpath Museum and Department of Biology, McGill UniversityVerified email at mcgill.ca
List of Publications of Werner DubitzkyFreelance Data ScientistVerified email at dubitzky.com
Fabrice E. GuilletFull Professor, Computer Science, LS2N CNRS UMR6004, University of Nantes, Polytech NantesVerified email at univ-nantes.fr
Melanie PragueFaculty Researchor - Inria, Inserm Bordeaux Population Health U1219, ISPED, Université BordeauxVerified email at inria.fr
Ayaz HyderThe Ohio State UniversityVerified email at osu.edu
Lucas BrotzHonorary Research Associate, Institute for the Oceans and Fisheries, University of British ColumbiaVerified email at oceans.ubc.ca
Aristides (Aris) MoustakasUniversity of CreteVerified email at infometricsdata.com

Robin Gras

Professor of Computer Science, University of Windsor

Verified email at uwindsor.ca - Homepage

Deep Learning Machine Learning Articial Intelligence Theoretical Biology Ecological Modelling


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Improving protein identification from peptide mass fingerprinting through a parameterized multi‐level scoring algorithm and an optimized peak detection R Gras, M Müller, E Gasteiger, S Gay, PA Binz, W Bienvenut, C Hoogland, ... ELECTROPHORESIS: An International Journal 20 (18), 3535-3550, 1999	202	1999
A molecular scanner to automate proteomic research and to display proteome images PA Binz, M Müller, D Walther, WV Bienvenut, R Gras, C Hoogland, ... Analytical chemistry 71 (21), 4981-4988, 1999	185	1999
An individual-based evolving predator-prey ecosystem simulation using a fuzzy cognitive map as the behavior model R Gras, D Devaurs, A Wozniak, A Aspinall Artificial life 15 (4), 423-463, 2009	148	2009
Popitam: towards new heuristic strategies to improve protein identification from tandem mass spectrometry data P Hernandez, R Gras, J Frey, RD Appel Proteomics 3 (6), 870-878, 2003	137	2003
Rule extraction from random forest: the RF+ HC methods M Mashayekhi, R Gras Advances in Artificial Intelligence: 28th Canadian Conference on Artificial …, 2015	79	2015
Rule Extraction from Decision Trees Ensembles: New Algorithms based on Heuristic Search and Sparse Group Lasso Methods M Mashayekhi, R Gras International Journal of Information Technology & Decision Making, 2016	61	2016
Conserved transcription factor binding sites of cancer markers derived from primary lung adenocarcinoma microarrays YL Yap, MP Wong, XW Zhang, D Hernandez, R Gras, DK Smith, ... Nucleic acids research 33 (1), 409-421, 2005	51	2005
Visualization and analysis of molecular scanner peptide mass spectra M Müller, R Gras, RD Appel, WV Bienvenut, DF Hochstrasser Journal of the American Society for Mass Spectrometry 13 (3), 221-231, 2002	48	2002
Computational aspects of protein identification by mass spectrometry. R Gras, M Müller Current Opinion in Molecular Therapeutics 3 (6), 526-532, 2001	43	2001
K-means clustering as a speciation mechanism within an individual-based evolving predator-prey ecosystem simulation A Aspinall, R Gras International Conference on Active Media Technology, 318-329, 2010	40	2010
Can we predict the unpredictable? A Golestani, R Gras Scientific Reports, 2014	39	2014
Speciation with gene flow in a heterogeneous virtual world: can physical obstacles accelerate speciation? A Golestani, R Gras, M Cristescu Proceedings of the Royal Society B: Biological Sciences 279 (1740), 3055-3064, 2012	38	2012
Species abundance patterns in an ecosystem simulation studied through Fisher’s logseries D Devaurs, R Gras Simulation Modelling Practice and Theory 18 (1), 100-123, 2010	37	2010
Regularity analysis of an individual-based ecosystem simulation A Golestani, R Gras Chaos: An Interdisciplinary Journal of Nonlinear Science 20 (4), 2010	36	2010
43 genes support the lungfish-coelacanth grouping related to the closest living relative of tetrapods with the Bayesian method under the coalescence model Y Shan, R Gras BMC Research Notes 4, 1-6, 2011	33	2011
Individual-based ecological models: Adjunctive tools or experimental systems? B MacPherson, R Gras Ecological Modelling 323, 106-114, 2016	30	2016
Individual-Based Ecological Models: Adjunctive Tools or Experimental Systems? B MacPherson, R Gras Ecological Modelling, 2015	30	2015
Predation Risk Tradeoffs in Prey: Effects on Energy and Behaviour M Khater, D Murariu, R Gras Theoretical Ecology, 2015	30	2015
Optimization and performance testing of a sequence processing pipeline applied to detection of nonindigenous species R Scott, A Zhan, EA Brown, FJJ Chain, ME Cristescu, R Gras, ... Evolutionary Applications 11 (6), 891-905, 2018	29	2018
MoDEL: an efficient strategy for ungapped local multiple alignment D Hernández, R Gras, R Appel Computational Biology and Chemistry 28 (2), 119-128, 2004	26	2004

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