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Charles Agoti
Charles Agoti
Research Scientist, KEMRI-Wellcome Trust
Verified email at kemri-wellcome.org - Homepage
Title
Cited by
Cited by
Year
Seroprevalence of anti–SARS-CoV-2 IgG antibodies in Kenyan blood donors
S Uyoga, IMO Adetifa, HK Karanja, J Nyagwange, J Tuju, P Wanjiku, ...
Science 371 (6524), 79-82, 2021
3202021
Global disparities in SARS-CoV-2 genomic surveillance
AF Brito, E Semenova, G Dudas, GW Hassler, CC Kalinich, MUG Kraemer, ...
Nature communications 13 (1), 7003, 2022
2252022
A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa
E Wilkinson, M Giovanetti, H Tegally, JE San, R Lessells, D Cuadros, ...
Science 374 (6566), 423-431, 2021
2012021
Human coronavirus NL63 molecular epidemiology and evolutionary patterns in rural coastal Kenya
PK Kiyuka, CN Agoti, PK Munywoki, R Njeru, A Bett, JR Otieno, GP Otieno, ...
The Journal of infectious diseases 217 (11), 1728-1739, 2018
1562018
The source of respiratory syncytial virus infection in infants: a household cohort study in rural Kenya
PK Munywoki, DC Koech, CN Agoti, C Lewa, PA Cane, GF Medley, ...
The Journal of infectious diseases 209 (11), 1685-1692, 2014
1532014
Influence of age, severity of infection, and co-infection on the duration of respiratory syncytial virus (RSV) shedding
PK Munywoki, DC Koech, CN Agoti, N Kibirige, J Kipkoech, PA Cane, ...
Epidemiology & Infection 143 (4), 804-812, 2015
1152015
The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance
H Tegally, JE San, M Cotten, M Moir, B Tegomoh, G Mboowa, DP Martin, ...
Science 378 (6615), eabq5358, 2022
1032022
Genetic relatedness of infecting and reinfecting respiratory syncytial virus strains identified in a birth cohort from rural Kenya
CN Agoti, AG Mwihuri, CJ Sande, CO Onyango, GF Medley, PA Cane, ...
The Journal of Infectious Diseases 206 (10), 1532-1541, 2012
1002012
Rapid spread and diversification of respiratory syncytial virus genotype ON1, Kenya
CN Agoti, JR Otieno, CW Gitahi, PA Cane, DJ Nokes
Emerging infectious diseases 20 (6), 950, 2014
992014
Local evolutionary patterns of human respiratory syncytial virus derived from whole-genome sequencing
CN Agoti, JR Otieno, PK Munywoki, AG Mwihuri, PA Cane, DJ Nokes, ...
Journal of virology 89 (7), 3444-3454, 2015
962015
Frequent asymptomatic respiratory syncytial virus infections during an epidemic in a rural Kenyan household cohort
PK Munywoki, DC Koech, CN Agoti, A Bett, PA Cane, GF Medley, ...
The Journal of infectious diseases 212 (11), 1711-1718, 2015
862015
Optimization of the SARS-CoV-2 ARTIC network V4 primers and whole genome sequencing protocol
AW Lambisia, KS Mohammed, TO Makori, L Ndwiga, MW Mburu, ...
Frontiers in Medicine 9, 836728, 2022
732022
CLIMB-COVID: continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance
SM Nicholls, R Poplawski, MJ Bull, A Underwood, M Chapman, ...
Genome biology 22, 1-21, 2021
732021
COVID-19 transmission dynamics underlying epidemic waves in Kenya
SPC Brand, J Ojal, R Aziza, V Were, EA Okiro, IK Kombe, C Mburu, ...
Science 374 (6570), 989-994, 2021
732021
Spread and evolution of respiratory syncytial virus A genotype ON1, Coastal Kenya, 2010–2015
JR Otieno, EM Kamau, CN Agoti, C Lewa, G Otieno, A Bett, M Ngama, ...
Emerging infectious diseases 23 (2), 264, 2017
722017
Molecular epidemiology of human rhinovirus infections in Kilifi, coastal Kenya
CO Onyango, SR Welch, PK Munywoki, CN Agoti, A Bett, M Ngama, ...
Journal of medical virology 84 (5), 823-831, 2012
712012
Forecasting the scale of the COVID-19 epidemic in Kenya
SPC Brand, R Aziza, IK Kombe, CN Agoti, J Hilton, KS Rock, A Parisi, ...
MedRxiv, 2020.04. 09.20059865, 2020
532020
Surveillance of respiratory viruses in the outpatient setting in rural coastal Kenya: baseline epidemiological observations
JU Nyiro, P Munywoki, E Kamau, C Agoti, A Gichuki, T Etyang, G Otieno, ...
Wellcome Open Research 3, 2018
492018
Tracking the introduction and spread of SARS-CoV-2 in coastal Kenya
G Githinji, ZR de Laurent, KS Mohammed, DO Omuoyo, PM Macharia, ...
Nature communications 12 (1), 4809, 2021
482021
Recent sequence variation in probe binding site affected detection of respiratory syncytial virus group B by real-time RT-PCR
E Kamau, CN Agoti, CS Lewa, J Oketch, BE Owor, GP Otieno, A Bett, ...
Journal of Clinical Virology 88, 21-25, 2017
482017
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