| DOWNY MILDEW RESISTANT 6 and DMR 6‐LIKE OXYGENASE 1 are partially redundant but distinct suppressors of immunity in Arabidopsis T Zeilmaker, NR Ludwig, J Elberse, MF Seidl, L Berke, A Van Doorn, ... The Plant Journal 81 (2), 210-222, 2015 | 185 | 2015 |
| The alternative reality of plant mitochondrial DNA: One ring does not rule them all A Kozik, BA Rowan, D Lavelle, L Berke, ME Schranz, RW Michelmore, ... PLoS genetics 15 (8), e1008373, 2019 | 181 | 2019 |
| The PLETHORA gene regulatory network guides growth and cell differentiation in Arabidopsis roots L Santuari, GF Sanchez-Perez, M Luijten, B Rutjens, I Terpstra, L Berke, ... The Plant Cell 28 (12), 2937-2951, 2016 | 143 | 2016 |
| Metabolism control over growth: a case for trehalose-6-phosphate in plants H Schluepmann, L Berke, GF Sanchez-Perez Journal of experimental botany 63 (9), 3379-3390, 2012 | 123 | 2012 |
| Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies a SNX1 phosphorylation site required for growth H Zhang, H Zhou, L Berke, AJR Heck, S Mohammed, B Scheres, ... Mol Cell Proteomics, 2013 | 101 | 2013 |
| Probing the roles of LRR RLK genes in Arabidopsis thaliana roots using a custom T-DNA insertion set CA ten Hove, Z Bochdanovits, VMA Jansweijer, FG Koning, L Berke, ... Plant molecular biology, 1-15, 2011 | 91 | 2011 |
| Targeted quantitative phosphoproteomics approach for the detection of phospho-tyrosine signaling in plants SC Mithoe, PJ Boersema, L Berke, B Snel, AJR Heck, FLH Menke Journal of Proteome Research 11 (1), 438–448, 2012 | 50 | 2012 |
| The plant Polycomb repressive complex 1 (PRC1) existed in the ancestor of seed plants and has a complex duplication history L Berke, B Snel BMC evolutionary biology 15 (1), 1-10, 2015 | 37 | 2015 |
| The Huperzia selago Shoot Tip Transcriptome Sheds New Light on the Evolution of Leaves AI Evkaikina, L Berke, MA Romanova, E Proux-Wéra, AN Ivanova, ... Genome Biology and Evolution 9 (9), 2444-2460, 2017 | 30 | 2017 |
| The Pectobacterium pangenome, with a focus on Pectobacterium brasiliense, shows a robust core and extensive exchange of genes from a shared gene pool EM Jonkheer, B Brankovics, IM Houwers, JM van der Wolf, PJM Bonants, ... BMC genomics 22 (1), 1-18, 2021 | 26 | 2021 |
| Contribution of the epigenetic mark H3K27me3 to functional divergence after whole genome duplication in Arabidopsis L Berke, GF Sanchez-Perez, B Snel Genome Biology 13 (10), R94, 2012 | 23 | 2012 |
| The Histone Modification H3K27me3 Is Retained after Gene Duplication and Correlates with Conserved Noncoding Sequences in Arabidopsis L Berke, B Snel Genome biology and evolution 6 (3), 572-579, 2014 | 13 | 2014 |
| PanTools v3: functional annotation, classification and phylogenomics EM Jonkheer, DJM van Workum, S Sheikhizadeh Anari, B Brankovics, ... Bioinformatics 38 (18), 4403-4405, 2022 | 10 | 2022 |
| What can the phylogeny of class I KNOX genes and their expression patterns in land plants tell us about the evolution of shoot development? AI Maksimova, L Berke, MG Salgado, EA Klimova, K Pawlowski, ... Botanical Journal of the Linnean Society 195 (3), 254-280, 2021 | 4 | 2021 |
| Phylogenomic analysis provides insights into MADS-box and TCP gene diversification and floral development of the Asteraceae, supported by de novo genome and transcriptome … W Xiong, J Risse, L Berke, T Zhao, H Van De Geest, C Oplaat, ... Frontiers in Plant Science 14, 1198909, 2023 | 1 | 2023 |
| The genome of Lactuca saligna, a wild relative of lettuce, provides insight into non-host resistance to the downy W Xiong, L Berke, R Michelmore, DJM van Workum, FFM Becker, ... | 1* | 2023 |
| Fusarium oxysporum effector clustering version 2: An updated pipeline to infer host range MA Brenes Guallar, L Fokkens, M Rep, L Berke, P van Dam Frontiers in Plant Science 13, 1012688, 2022 | 1 | 2022 |
| Hop EST resources for marker development B Javornik, L Berke, Z Luthar, J Jakše, A Čerenak, JM Jeltsch, A Forster, ... II International Humulus Symposium 848, 65-72, 2008 | 1 | 2008 |
| Genome assembly and analysis of Lactuca virosa: implications for lettuce breeding W Xiong, DJM van Workum, L Berke, LV Bakker, E Schijlen, FFM Becker, ... G3: Genes, Genomes, Genetics 13 (11), jkad204, 2023 | | 2023 |
| Fusarium oxysporum Effector Clustering version 2 (FoEC2): an updated pipeline to infer host range MA Brenes Guallar, L Fokkens, M Rep, L Berke, P van Dam bioRxiv, 2022.08. 08.503139, 2022 | | 2022 |
Berend SnelUtrecht UniversityVerified email at uu.nl
