| The human transcription factors SA Lambert, A Jolma, LF Campitelli, PK Das, Y Yin, M Albu, X Chen, ... Cell 172 (4), 650-665, 2018 | 2964 | 2018 |
| DNA-binding specificities of human transcription factors A Jolma, J Yan, T Whitington, J Toivonen, KR Nitta, P Rastas, ... Cell 152 (1), 327-339, 2013 | 1401 | 2013 |
| Impact of cytosine methylation on DNA binding specificities of human transcription factors Y Yin, E Morgunova, A Jolma, E Kaasinen, B Sahu, S Khund-Sayeed, ... Science 356 (6337), eaaj2239, 2017 | 1155 | 2017 |
| Genome‐wide analysis of ETS‐family DNA‐binding in vitro and in vivo GH Wei, G Badis, MF Berger, T Kivioja, K Palin, M Enge, M Bonke, ... The EMBO journal 29 (13), 2147-2160, 2010 | 673 | 2010 |
| DNA-dependent formation of transcription factor pairs alters their binding specificity A Jolma, Y Yin, KR Nitta, K Dave, A Popov, M Taipale, M Enge, T Kivioja, ... Nature 527 (7578), 384-388, 2015 | 576 | 2015 |
| Multiplexed massively parallel SELEX for characterization of human transcription factor binding specificities A Jolma, T Kivioja, J Toivonen, L Cheng, G Wei, M Enge, M Taipale, ... Genome research 20 (6), 861-873, 2010 | 533 | 2010 |
| Transcription factor binding in human cells occurs in dense clusters formed around cohesin anchor sites J Yan, M Enge, T Whitington, K Dave, J Liu, I Sur, B Schmierer, A Jolma, ... Cell 154 (4), 801-813, 2013 | 392 | 2013 |
| Conservation of transcription factor binding specificities across 600 million years of bilateria evolution KR Nitta, A Jolma, Y Yin, E Morgunova, T Kivioja, J Akhtar, K Hens, ... elife 4, e04837, 2015 | 267 | 2015 |
| A prostate cancer susceptibility allele at 6q22 increases RFX6 expression by modulating HOXB13 chromatin binding Q Huang, T Whitington, P Gao, JF Lindberg, Y Yang, J Sun, MR Väisänen, ... Nature genetics 46 (2), 126-135, 2014 | 229 | 2014 |
| Myt1l safeguards neuronal identity by actively repressing many non-neuronal fates M Mall, MS Kareta, S Chanda, H Ahlenius, N Perotti, B Zhou, SD Grieder, ... Nature 544 (7649), 245-249, 2017 | 218 | 2017 |
| Multiparameter functional diversity of human C2H2 zinc finger proteins FW Schmitges, E Radovani, HS Najafabadi, M Barazandeh, LF Campitelli, ... Genome research 26 (12), 1742-1752, 2016 | 181 | 2016 |
| Transcription factor family‐specific DNA shape readout revealed by quantitative specificity models L Yang, Y Orenstein, A Jolma, Y Yin, J Taipale, R Shamir, R Rohs Molecular systems biology 13 (2), 910, 2017 | 125 | 2017 |
| Binding specificities of human RNA-binding proteins toward structured and linear RNA sequences A Jolma, J Zhang, E Mondragón, E Morgunova, T Kivioja, KU Laverty, ... Genome research 30 (7), 962-973, 2020 | 92 | 2020 |
| Structural insights into the DNA-binding specificity of E2F family transcription factors E Morgunova, Y Yin, A Jolma, K Dave, B Schmierer, A Popov, N Eremina, ... Nature communications 6 (1), 10050, 2015 | 69 | 2015 |
| Methods for analysis of transcription factor DNA-binding specificity in vitro A Jolma, J Taipale A Handbook of Transcription Factors, 155-173, 2011 | 44 | 2011 |
| A protein activity assay to measure global transcription factor activity reveals determinants of chromatin accessibility B Wei, A Jolma, B Sahu, LM Orre, F Zhong, F Zhu, T Kivioja, I Sur, J Lehtiö, ... Nature biotechnology 36 (6), 521-529, 2018 | 41 | 2018 |
| Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima E Morgunova, Y Yin, PK Das, A Jolma, F Zhu, A Popov, Y Xu, L Nilsson, ... Elife 7, e32963, 2018 | 39 | 2018 |
| A GO catalogue of human DNA-binding transcription factors RC Lovering, P Gaudet, ML Acencio, A Ignatchenko, A Jolma, O Fornes, ... Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1864 (11-12 …, 2021 | 26 | 2021 |
| RNA-binding proteins that lack canonical RNA-binding domains are rarely sequence-specific D Ray, KU Laverty, A Jolma, K Nie, R Samson, SE Pour, CL Tam, ... Scientific Reports 13 (1), 5238, 2023 | 21 | 2023 |
| HOCOMOCO in 2024: a rebuild of the curated collection of binding models for human and mouse transcription factors IE Vorontsov, IA Eliseeva, A Zinkevich, M Nikonov, S Abramov, A Boytsov, ... Nucleic Acids Research 52 (D1), D154-D163, 2024 | 20 | 2024 |
Jussi TaipaleUniversity of Cambridge, Department of BiochemistryVerified email at cam.ac.uk
