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R Shi
R Shi
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Year
Facile means for quantifying microRNA expression by real-time PCR
R Shi, VL Chiang
Biotechniques 39 (4), 519-525, 2005
8642005
Novel and Mechanical Stress–Responsive MicroRNAs in Populus trichocarpa That Are Absent from Arabidopsis
S Lu, YH Sun, R Shi, C Clark, L Li, VL Chiang
The Plant Cell 17 (8), 2186-2203, 2005
7212005
Towards a Systems Approach for Lignin Biosynthesis in Populus trichocarpa: Transcript Abundance and Specificity of the Monolignol Biosynthetic Genes
R Shi, YH Sun, Q Li, S Heber, R Sederoff, VL Chiang
Plant and Cell Physiology 51 (1), 144-163, 2010
3162010
Improving wood properties for wood utilization through multi-omics integration in lignin biosynthesis
JP Wang, ML Matthews, CM Williams, R Shi, C Yang, S Tunlaya-Anukit, ...
Nature communications 9 (1), 1579, 2018
1992018
Complete proteomic-based enzyme reaction and inhibition kinetics reveal how monolignol biosynthetic enzyme families affect metabolic flux and lignin in Populus trichocarpa
JP Wang, PP Naik, HC Chen, R Shi, CY Lin, J Liu, CM Shuford, Q Li, ...
The Plant Cell 26 (3), 894-914, 2014
1552014
A simple improved-throughput xylem protoplast system for studying wood formation
YC Lin, W Li, H Chen, Q Li, YH Sun, R Shi, CY Lin, JP Wang, HC Chen, ...
Nature Protocols 9 (9), 2194-2205, 2014
852014
Systems Biology of Lignin Biosynthesis in Populus trichocarpa: Heteromeric 4-Coumaric Acid:Coenzyme A Ligase Protein Complex Formation, Regulation, and…
HC Chen, J Song, JP Wang, YC Lin, J Ducoste, CM Shuford, J Liu, Q Li, ...
The Plant Cell 26 (3), 876-893, 2014
842014
Regulation of phenylalanine ammonia-lyase (PAL) gene family in wood forming tissue of Populus trichocarpa
R Shi, CM Shuford, JP Wang, YH Sun, Z Yang, HC Chen, ...
Planta 238, 487-497, 2013
772013
Phosphorylation is an on/off switch for 5-hydroxyconiferaldehyde O-methyltransferase activity in poplar monolignol biosynthesis
JP Wang, L Chuang, PL Loziuk, H Chen, YC Lin, R Shi, GZ Qu, ...
Proceedings of the National Academy of Sciences 112 (27), 8481-8486, 2015
722015
Tissue and cell-type co-expression networks of transcription factors and wood component genes in Populus trichocarpa
R Shi, JP Wang, YC Lin, Q Li, YH Sun, H Chen, RR Sederoff, VL Chiang
Planta 245, 927-938, 2017
702017
A robust chromatin immunoprecipitation protocol for studying transcription factor–DNA interactions and histone modifications in wood-forming tissue
W Li, YC Lin, Q Li, R Shi, CY Lin, H Chen, L Chuang, GZ Qu, RR Sederoff, ...
nature protocols 9 (9), 2180-2193, 2014
692014
Reciprocal cross-regulation of VND and SND multigene TF families for wood formation in Populus trichocarpa
YCJ Lin, H Chen, Q Li, W Li, JP Wang, R Shi, S Tunlaya-Anukit, P Shuai, ...
Proceedings of the National Academy of Sciences 114 (45), E9722-E9729, 2017
672017
Monolignol Pathway 4-Coumaric Acid:Coenzyme A Ligases in Populus. trichocarpa: Novel Specificity, Metabolic Regulation, and Simulation of Coenzyme A…
HC Chen, J Song, CM Williams, CM Shuford, J Liu, JP Wang, Q Li, R Shi, ...
Plant physiology 161 (3), 1501-1516, 2013
672013
Filter paper-based spin column method for cost-efficient DNA or RNA purification
R Shi, RS Lewis, DR Panthee
Plos one 13 (12), e0203011, 2018
652018
Poly (T) Adaptor RT-PCR
R Shi, YH Sun, XH Zhang, VL Chiang
Next-generation microRNA expression profiling technology: methods and…, 2012
612012
Specific down-regulation of PAL genes by artificial microRNAs in Populus trichocarpa
R Shi, C Yang, S Lu, R Sederoff, VL Chiang
Planta 232, 1281-1288, 2010
602010
RNA silencing in plants by the expression of siRNA duplexes
S Lu, R Shi, CC Tsao, X Yi, L Li, VL Chiang
Nucleic acids research 32 (21), e171-e171, 2004
522004
Comprehensive Quantification of Monolignol-Pathway Enzymes in Populus trichocarpa by Protein Cleavage Isotope Dilution Mass Spectrometry
CM Shuford, Q Li, YH Sun, HC Chen, J Wang, R Shi, RR Sederoff, ...
Journal of proteome research 11 (6), 3390-3404, 2012
472012
Monolignol Benzoates Incorporate into the Lignin of Transgenic Populus trichocarpa Depleted in C3H and C4H
H Kim, Q Li, SD Karlen, RA Smith, R Shi, J Liu, C Yang, S Tunlaya-Anukit, ...
ACS Sustainable Chemistry & Engineering 8 (9), 3644-3654, 2020
452020
The elucidation of the lignin structure effect on the cellulase-mediated saccharification by genetic engineering poplars (Populus nigra L. Populus maximowiczii A.)
D Min, C Yang, R Shi, H Jameel, V Chiang, H Chang
Biomass and Bioenergy 58, 52-57, 2013
442013
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