Hideo Matsuda
Hideo Matsuda
Graduate School of Information Science and Technology, Osaka University
Verified email at - Homepage
Cited by
Cited by
The transcriptional landscape of the mammalian genome
P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ...
science 309 (5740), 1559-1563, 2005
Diagnostic assessment of deep learning algorithms for detection of lymph node metastases in women with breast cancer
BE Bejnordi, M Veta, PJ Van Diest, B Van Ginneken, N Karssemeijer, ...
Jama 318 (22), 2199-2210, 2017
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
RIKEN Genome Exploration Research Group Phase I Team: Carninci P. 2 Hayatsu ...
Nature 420 (6915), 563-573, 2002
fastDNAml: a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood
GJ Olsen, H Matsuda, R Hagstrom, R Overbeek
Bioinformatics 10 (1), 41-48, 1994
Functional annotation of a full-length mouse cDNA collection
General organizer Hayashizaki Y. yosihide@ gsc. riken. go. uk 1 2 44 b
Nature 409 (6821), 685-690, 2001
Biased biological functions of horizontally transferred genes in prokaryotic genomes
Y Nakamura, T Itoh, H Matsuda, T Gojobori
Nature genetics 36 (7), 760-766, 2004
Integrative annotation of 21,037 human genes validated by full-length cDNA clones
T Imanishi, T Itoh, Y Suzuki, C O'donovan, S Fukuchi, KO Koyanagi, ...
PLoS biology 2 (6), e162, 2004
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
Nature genetics 41 (5), 553-562, 2009
Direct cell–cell contact between mature osteoblasts and osteoclasts dynamically controls their functions in vivo
M Furuya, J Kikuta, S Fujimori, S Seno, H Maeda, M Shirazaki, M Uenaka, ...
Nature communications 9 (1), 300, 2018
Classifying molecular sequences using a linkage graph with their pairwise similarities
H Matsuda, T Ishihara, A Hashimoto
Theoretical Computer Science 210 (2), 305-325, 1999
A multiple alignment algorithm for metabolic pathway analysis using enzyme hierarchy.
Y Tohsato, H Matsuda, A Hashimoto
ISMB 8, 376-383, 2000
Mouse proteome analysis
A Kanapin, S Batalov, MJ Davis, J Gough, S Grimmond, H Kawaji, ...
Genome research 13 (6b), 1335-1344, 2003
Proinflammatory cytokine interleukin-1β suppresses cold-induced thermogenesis in adipocytes
T Goto, S Naknukool, R Yoshitake, Y Hanafusa, S Tokiwa, Y Li, ...
Cytokine 77, 107-114, 2016
Automatic detection of conserved gene clusters in multiple genomes by graph comparison and P-quasi grouping
W Fujibuchi, H Ogata, H Matsuda, M Kanehisa
Nucleic acids research 28 (20), 4029-4036, 2000
Protein phylogenetic inference using maximum likelihood with a genetic algorithm
H Matsuda
Pacific symposium on biocomputing 96, 512-523, 1996
PDB-REPRDB: a database of representative protein chains from the Protein Data Bank (PDB)
T Noguchi, H Matsuda, Y Akiyama
Nucleic Acids Research 29 (1), 219-220, 2001
Correlation between genome reduction and bacterial growth
M Kurokawa, S Seno, H Matsuda, BW Ying
DNA research 23 (6), 517-525, 2016
Graph-based clustering for finding distant relationships in a large set of protein sequences
H Kawaji, Y Takenaka, H Matsuda
Bioinformatics 20 (2), 243-252, 2004
The hepatokine FGF21 is crucial for peroxisome proliferator-activated receptor-α agonist-induced amelioration of metabolic disorders in obese mice
T Goto, M Hirata, Y Aoki, M Iwase, H Takahashi, M Kim, Y Li, HF Jheng, ...
Journal of Biological Chemistry 292 (22), 9175-9190, 2017
In vivo dynamic analysis of BMP-2-induced ectopic bone formation
K Hashimoto, T Kaito, M Furuya, S Seno, D Okuzaki, J Kikuta, ...
Scientific reports 10 (1), 4751, 2020
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