Jochen Gehrig
Jochen Gehrig
Application Development, Acquifer/Luxendo, Heidelberg, Germany
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Cited by
Cited by
Two independent transcription initiation codes overlap on vertebrate core promoters
V Haberle, N Li, Y Hadzhiev, C Plessy, C Previti, C Nepal, J Gehrig, ...
Nature 507 (7492), 381-385, 2014
Automated high-throughput mapping of promoter-enhancer interactions in zebrafish embryos
J Gehrig, M Reischl, É Kalmár, M Ferg, Y Hadzhiev, A Zaucker, C Song, ...
Nature methods 6 (12), 911-916, 2009
Dynamic regulation of the transcription initiation landscape at single nucleotide resolution during vertebrate embryogenesis
C Nepal, Y Hadzhiev, C Previti, V Haberle, N Li, H Takahashi, ...
Genome research 23 (11), 1938-1950, 2013
Automated feature detection and imaging for high-resolution screening of zebrafish embryos
R Peravali, J Gehrig, S Giselbrecht, DS Lütjohann, Y Hadzhiev, F Müller, ...
Biotechniques 50 (5), 319-324, 2011
The TATA‐binding protein regulates maternal mRNA degradation and differential zygotic transcription in zebrafish
M Ferg, R Sanges, J Gehrig, J Kiss, M Bauer, A Lovas, M Szabo, L Yang, ...
The EMBO journal 26 (17), 3945-3956, 2007
Automated high-throughput heartbeat quantification in medaka and zebrafish embryos under physiological conditions
J Gierten, C Pylatiuk, OT Hammouda, C Schock, J Stegmaier, J Wittbrodt, ...
Scientific Reports 10 (1), 2046, 2020
Generation of orientation tools for automated zebrafish screening assays using desktop 3D printing
JN Wittbrodt, U Liebel, J Gehrig
BMC biotechnology 14, 1-6, 2014
Zebrafish as a model for drug screening in genetic kidney diseases
J Gehrig, G Pandey, JH Westhoff
Frontiers in Pediatrics 6, 183, 2018
Development of an automated imaging pipeline for the analysis of the zebrafish larval kidney
JH Westhoff, S Giselbrecht, M Schmidts, S Schindler, PL Beales, ...
PLoS One 8 (12), e82137, 2013
Multi-template matching: a versatile tool for object-localization in microscopy images
LSV Thomas, J Gehrig
BMC bioinformatics 21, 1-8, 2020
In vivo High-Content Screening in Zebrafish for Developmental Nephrotoxicity of Approved Drugs
JH Westhoff, PJ Steenbergen, LSV Thomas, J Heigwer, T Bruckner, ...
Frontiers in cell and developmental biology 8, 583, 2020
A smart imaging workflow for organ-specific screening in a cystic kidney zebrafish disease model
G Pandey, JH Westhoff, F Schaefer, J Gehrig
International Journal of Molecular Sciences 20 (6), 1290, 2019
The Tetraodon nigroviridis reference transcriptome: developmental transition, length retention and microsynteny of long non-coding RNAs in a compact vertebrate …
S Basu, Y Hadzhiev, G Petrosino, C Nepal, J Gehrig, O Armant, M Ferg, ...
Scientific Reports 6 (1), 33210, 2016
Description of embryonic development of spotted green pufferfish (Tetraodon nigroviridis)
A Zaucker, T Bodur, H Roest Crollius, Y Hadzhiev, J Gehrig, F Loosli, ...
Zebrafish 11 (6), 509-517, 2014
ImageJ/Fiji ROI 1-click tools for rapid manual image annotations and measurements
LSV Thomas, J Gehrig
microPublication Biology, 2020
A multiparametric assay platform for simultaneous in vivo assessment of pronephric morphology, renal function and heart rate in larval zebrafish
PJ Steenbergen, J Heigwer, G Pandey, B Tönshoff, J Gehrig, JH Westhoff
Cells 9 (5), 1269, 2020
Fiji plugins for qualitative image annotations: routine analysis and application to image classification
LSV Thomas, F Schaefer, J Gehrig
F1000Research 9, 2020
A Novel High-Content Screening Assay Identified Belinostat as Protective in a FSGS—Like Zebrafish Model
M Schindler, F Siegerist, T Lange, S Simm, SM Bach, M Klawitter, ...
Journal of the American Society of Nephrology 34 (12), 1977-1990, 2023
Device and method for microscopy on a plurality of samples
U Liebel, J Gehrig
US Patent 9,824,259, 2017
ZebrafishMiner: an open source software for interactive evaluation of domain-specific fluorescence in zebrafish
M Reischl, A Bartschat, U Liebel, J Gehrig, F Müller, R Mikut
Current Directions in Biomedical Engineering 3 (2), 199-202, 2017
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