Henk van den Toorn
Henk van den Toorn
Bioinformatician at Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University
Verified email at
Cited by
Cited by
Toward full peptide sequence coverage by dual fragmentation combining electron-transfer and higher-energy collision dissociation tandem mass spectrometry
CK Frese, AFM Altelaar, H van den Toorn, D Nolting, J Griep-Raming, ...
Analytical chemistry 84 (22), 9668-9673, 2012
Personalized proteome profiles of healthy and tumor human colon organoids reveal both individual diversity and basic features of colorectal cancer
A Cristobal, HWP van den Toorn, M van de Wetering, H Clevers, ...
Cell reports 18 (1), 263-274, 2017
Quantitative and qualitative proteome characteristics extracted from in-depth integrated genomics and proteomics analysis
TY Low, S van Heesch, H van den Toorn, P Giansanti, A Cristobal, ...
Cell reports 5 (5), 1469-1478, 2013
Toward an optimized workflow for middle-down proteomics
A Cristobal, F Marino, H Post, HWP van den Toorn, S Mohammed, ...
Analytical chemistry 89 (6), 3318-3325, 2017
The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium
RG Côté, J Griss, JA Dianes, R Wang, JC Wright, HWP van den Toorn, ...
Molecular & Cellular Proteomics 11 (12), 1682-1689, 2012
An augmented multiple-protease-based human phosphopeptide atlas
P Giansanti, TT Aye, H van den Toorn, M Peng, B van Breukelen, ...
Cell reports 11 (11), 1834-1843, 2015
Deep proteome profiling of Trichoplax adhaerens reveals remarkable features at the origin of metazoan multicellularity
JH Ringrose, HW Van Den Toorn, M Eitel, H Post, P Neerincx, ...
Nature communications 4 (1), 1408, 2013
Selectivity in Enrichment of cAMP-dependent Protein Kinase Regulatory Subunits Type I and Type II and Their Interactors Using Modified cAMP Affinity Resins* S
TT Aye, S Mohammed, HWP van den Toorn, TAB van Veen, ...
Molecular & Cellular Proteomics 8 (5), 1016-1028, 2009
A serum proteome signature to predict mortality in severe COVID-19 patients
F Völlmy, H Van Den Toorn, RZ Chiozzi, O Zucchetti, A Papi, CA Volta, ...
Life Science Alliance 4 (9), 2021
Characterization of Biases in Phosphopeptide Enrichment by Ti4+-Immobilized Metal Affinity Chromatography and TiO2 Using a Massive Synthetic Library and …
L Matheron, H van den Toorn, AJR Heck, S Mohammed
Analytical chemistry 86 (16), 8312-8320, 2014
Ultra acidic strong cation exchange enabling the efficient enrichment of basic phosphopeptides
ML Hennrich, HWP van den Toorn, V Groenewold, AJR Heck, ...
Analytical chemistry 84 (4), 1804-1808, 2012
qcML: an exchange format for quality control metrics from mass spectrometry experiments
M Walzer, LE Pernas, S Nasso, W Bittremieux, S Nahnsen, ...
Molecular & Cellular Proteomics 13 (8), 1905-1913, 2014
Effect of chemical modifications on peptide fragmentation behavior upon electron transfer induced dissociation
ML Hennrich, PJ Boersema, H van den Toorn, N Mischerikow, AJR Heck, ...
Analytical chemistry 81 (18), 7814-7822, 2009
StatQuant: a post-quantification analysis toolbox for improving quantitative mass spectrometry
B van Breukelen, HWP van den Toorn, MM Drugan, AJR Heck
Bioinformatics 25 (11), 1472-1473, 2009
Discovery and quantification of nonhuman proteins in human milk
J Zhu, L Garrigues, H Van den Toorn, B Stahl, AJR Heck
Journal of proteome research 18 (1), 225-238, 2018
Single-cell derived tumor organoids display diversity in HLA class I peptide presentation
LC Demmers, K Kretzschmar, A Van Hoeck, YE Bar-Epraïm, ...
Nature Communications 11 (1), 5338, 2020
Benefits of collisional cross section assisted precursor selection (caps-PASEF) for cross-linking mass spectrometry
B Steigenberger, HWP van den Toorn, E Bijl, JF Greisch, O Räther, ...
Molecular & Cellular Proteomics 19 (10), 1677-1687, 2020
RockerBox: analysis and filtering of massive proteomics search results
HWP van den Toorn, J Muñoz, S Mohammed, R Raijmakers, AJR Heck, ...
Journal of proteome research 10 (3), 1420-1424, 2011
Gaining confidence in the elusive histidine phosphoproteome
CM Potel, MH Lin, N Prust, HWP van den Toorn, AJR Heck, S Lemeer
Analytical chemistry 91 (9), 5542-5547, 2019
Opposite Electron-Transfer Dissociation and Higher-Energy Collisional Dissociation Fragmentation Characteristics of Proteolytic K/R(X)n and (X)nK/R Peptides …
L Tsiatsiani, P Giansanti, RA Scheltema, H van den Toorn, CM Overall, ...
Journal of Proteome Research 16 (2), 852-861, 2017
The system can't perform the operation now. Try again later.
Articles 1–20